Ss1.1-reru33c_o21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTCCCCAATGAGGTCCTCAAAGGTGATGTCCTCCCACTCCAGCACCGGGTAACTCAGGG GCTCAGGCGGTGGTTTTGGCCGCCGGGTCAGTGTCAAGGTGCCTGAGCTGAACTGCAGGA TGGTCTCCTCGCCCGATCCCGACTGGTAGGTGAAGGTGCGTCTGCGATGCAGGCAGCTCC TGCGGATGCACGCCAGGGTTAAGAGGGCAGCCAGGATGGTGAGGCAGGTGGCGGACACCG AGCCCACCACAGCCAGGACCAGCTGCGGATCCAGGCCCTCTTCCACGGCCTGCACCTCCT GGACGGGACGCTCGCTCTGCAGCCCGTTGCCCAACGTGGACTCCTCTACCACGTTGCTCC AGTCACCGGGGCCCTGGACGCTGGCCCGCACGCGGAACAGGTAGCGCGTGCTGGCGTTGA GGCCGCGGACGATGGTGCTCGTCTCCTCGGGCCTGTCCACGTCCATCCACAGCGGGTCTC CCGAGCCCCCGGCCACCTGCACCTCCACGATGTACTTGGATATAGGCCCAGCCGGAGCCT CTGGGCGCTGCCACACCAGCTGGATCTCCGAGTCTGAAAGCGCCTGGGCGTGGAGGTGTC GGGGGTCTGGGGGTCCGCTGGGGGGCAGAAGCACGCGCGCAGGGGGTGAGGCTGGGCCCA GGAGGGTACAGTGGTACAGCCGCACGTCCAGCTGGTAGTGGGTCCCAGGCGTGAGTCCCG TCAGGAGGGCGGTGCGGGCCTGGGGGGACGAGACGTTCTCCCGCCGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTCCCCAATGAGGTCCTCAAAGGTGATGTCCTCCCACTCCAGCACCGGGTAACTCAGGG GCTCAGGCGGTGGTTTTGGCCGCCGGGTCAGTGTCAAGGTGCCTGAGCTGAACTGCAGGA TGGTCTCCTCGCCCGATCCCGACTGGTAGGTGAAGGTGCGTCTGCGATGCAGGCAGCTCC TGCGGATGCACGCCAGGGTTAAGAGGGCAGCCAGGATGGTGAGGCAGGTGGCGGACACCG AGCCCACCACAGCCAGGACCAGCTGCGGATCCAGGCCCTCTTCCACGGCCTGCACCTCCT GGACGGGACGCTCGCTCTGCAGCCCGTTGCCCAACGTGGACTCCTCTACCACGTTGCTCC AGTCACCGGGGCCCTGGACGCTGGCCCGCACGCGGAACAGGTAGCGCGTGCTGGCGTTGA GGCCGCGGACGATGGTGCTCGTCTCCTCGGGCCTGTCCACGTCCATCCACAGCGGGTCTC CCGAGCCCCCGGCCACCTGCACCTCCACGATGTACTTGGATATAGGCCCAGCCGGAGCCT CTGGGCGCTGCCACACCAGCTGGATCTCCGAGTCTGAAAGCGCCTGGGCGTGGAGGTGTC GGGGGTCTGGGGGTCCGCTGGGGGGCAGAAGCACGCGCGCAGGGGGTGAGGCTGGGCCCA GGAGGGTACAGTGGTACAGCCGCACGTCCAGCTGGTAGTGGGTCCCAGGCGTGAGTCCCG TCAGGAGGGCGGTGCGGGCCTGGGGGGACGAGACGTTCTCCCGCCGCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 1-134, gnl|bosTau2|chr3 (67637490-67637623) | |
| 1-134, gnl|canFam2|chr15 (19856032-19855868) | |
| 1-134, gnl|danRer3|chrUn (16991691-16991855) | |
| 1-134, gnl|dasNov1|scaffold_6598 (116786-116622) | |
| 1-134, gnl|echTel1|scaffold_310577 (17756-17592) | |
| 1-134, gnl|fr1|chrUn (115968889-115969053) | |
| 1-134, gnl|galGal2|chr8 (19966538-19966702) | |
| 1-134, gnl|hg17|chr1 (43451962-43452126) | |
| 1-134, gnl|Hg17|chr1 (43452095-43451962) | |
| 1-134, gnl|loxAfr1|scaffold_62621 (9703-9539) | |
| 1-134, gnl|mm7|chr4 (117852712-117852548) | |
| 1-134, gnl|Mm7|chr4 (117852577-117852710) | |
| 1-134, gnl|monDom2|scaffold_87 (201286-201122) | |
| 1-134, gnl|oryCun1|scaffold_185440 (4209-4373) | |
| 1-134, gnl|panTro1|chr1 (44430575-44430739) | |
| 1-134, gnl|rheMac2|chr1 (46230559-46230723) | |
| 1-134, gnl|rn3|chr5 (138956226-138956062) | |
| 1-134, gnl|tetNig1|chr1 (16282633-16282796) | |
| 1-134, gnl|xenTro1|scaffold_1 (5494045-5494209) | |
| 324-623, gnl|bosTau2|chr3 (67640764-67641061) | |
| 324-623, gnl|canFam2|chr15 (19858853-19858623) | |
| 324-623, gnl|danRer3|chrUn (16989560-16989767) | |
| 324-623, gnl|echTel1|scaffold_310577 (22082-21852) | |
| 324-623, gnl|fr1|chrUn (115968221-115968429) | |
| 324-623, gnl|galGal2|chr8 (19965581-19965802) | |
| 324-623, gnl|hg17|chr1 (43447870-43448099) | |
| 324-623, gnl|Hg17|chr1 (43448190-43447893) | |
| 324-623, gnl|mm7|chr4 (117855623-117855393) | |
| 324-623, gnl|Mm7|chr4 (117855300-117855597) | |
| 324-623, gnl|monDom2|scaffold_87 (203591-203364) | |
| 324-623, gnl|oryCun1|scaffold_185440 (916-1144) | |
| 324-623, gnl|panTro1|chr1 (44426467-44426697) | |
| 324-623, gnl|rheMac2|chr1 (46226479-46226709) | |
| 324-623, gnl|rn3|chr5 (138959391-138959161) | |
| 324-623, gnl|tetNig1|chr1 (16281966-16282173) | |
| 324-623, gnl|xenTro1|scaffold_1 (5490709-5490923) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-134, gnl|bosTau2|chr3 (67637490-67637623) | |
| 1-134, gnl|canFam2|chr15 (19856032-19855868) | |
| 1-134, gnl|danRer3|chrUn (16991691-16991855) | |
| 1-134, gnl|dasNov1|scaffold_6598 (116786-116622) | |
| 1-134, gnl|echTel1|scaffold_310577 (17756-17592) | |
| 1-134, gnl|fr1|chrUn (115968889-115969053) | |
| 1-134, gnl|galGal2|chr8 (19966538-19966702) | |
| 1-134, gnl|hg17|chr1 (43451962-43452126) | |
| 1-134, gnl|Hg17|chr1 (43452095-43451962) | |
| 1-134, gnl|loxAfr1|scaffold_62621 (9703-9539) | |
| 1-134, gnl|mm7|chr4 (117852712-117852548) | |
| 1-134, gnl|Mm7|chr4 (117852577-117852710) | |
| 1-134, gnl|monDom2|scaffold_87 (201286-201122) | |
| 1-134, gnl|oryCun1|scaffold_185440 (4209-4373) | |
| 1-134, gnl|panTro1|chr1 (44430575-44430739) | |
| 1-134, gnl|rheMac2|chr1 (46230559-46230723) | |
| 1-134, gnl|rn3|chr5 (138956226-138956062) | |
| 1-134, gnl|tetNig1|chr1 (16282633-16282796) | |
| 1-134, gnl|xenTro1|scaffold_1 (5494045-5494209) | |
| 324-623, gnl|bosTau2|chr3 (67640764-67641061) | |
| 324-623, gnl|canFam2|chr15 (19858853-19858623) | |
| 324-623, gnl|danRer3|chrUn (16989560-16989767) | |
| 324-623, gnl|echTel1|scaffold_310577 (22082-21852) | |
| 324-623, gnl|fr1|chrUn (115968221-115968429) | |
| 324-623, gnl|galGal2|chr8 (19965581-19965802) | |
| 324-623, gnl|hg17|chr1 (43447870-43448099) | |
| 324-623, gnl|Hg17|chr1 (43448190-43447893) | |
| 324-623, gnl|mm7|chr4 (117855623-117855393) | |
| 324-623, gnl|Mm7|chr4 (117855300-117855597) | |
| 324-623, gnl|monDom2|scaffold_87 (203591-203364) | |
| 324-623, gnl|oryCun1|scaffold_185440 (916-1144) | |
| 324-623, gnl|panTro1|chr1 (44426467-44426697) | |
| 324-623, gnl|rheMac2|chr1 (46226479-46226709) | |
| 324-623, gnl|rn3|chr5 (138959391-138959161) | |
| 324-623, gnl|tetNig1|chr1 (16281966-16282173) | |
| 324-623, gnl|xenTro1|scaffold_1 (5490709-5490923) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) | |
| eru (0.120048) |