Ss1.1-reru34c_c22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGTACTCTTCCGTGGAGAACATCCAGCGTGTGGCCGCAGGGTGTGCTGTGCGAGTTGGCC CAGGACAAGGAGGCGGCCGACGCTATTGATGCCGAGGGGGCCTCGTCCCCCCTCATGGAG CTCCTGCACTCCCGCAATGAGGGCACTGCCACCTATGCTGCTGCTGTCTTGTTCCGCATC TCTGAGGACAAGAACCCAGATTACCGTAAGCGTGTGTCTGTGGAACTCACCAACTCCCTC TTCAAGCACGACCCTGCAGCCTGGGAGGCTGCCCAGAGCATGATCCCCATCAATGAACCC TATGCCGATGACATGGATGCCACCTACCGCCCCATGTACTCAAGTGATGTGCCCCTGGAC CCCCTGGAGATGCACATGGACATGGACGGGGACTATCCCATGGACACCTACAGCGACGGC CTCAGGCCCCCCTACCCCGCTGCAGACCACATGCTGGCCTAGCTGGCTGGACCCCAGCGC TGTTCCCCATCTGAGAGGCTCTCCGTGCAGGCGATGGGACGAGATAGCAAAGTGCCTGAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGTACTCTTCCGTGGAGAACATCCAGCGTGTGGCCGCAGGGTGTGCTGTGCGAGTTGGCC CAGGACAAGGAGGCGGCCGACGCTATTGATGCCGAGGGGGCCTCGTCCCCCCTCATGGAG CTCCTGCACTCCCGCAATGAGGGCACTGCCACCTATGCTGCTGCTGTCTTGTTCCGCATC TCTGAGGACAAGAACCCAGATTACCGTAAGCGTGTGTCTGTGGAACTCACCAACTCCCTC TTCAAGCACGACCCTGCAGCCTGGGAGGCTGCCCAGAGCATGATCCCCATCAATGAACCC TATGCCGATGACATGGATGCCACCTACCGCCCCATGTACTCAAGTGATGTGCCCCTGGAC CCCCTGGAGATGCACATGGACATGGACGGGGACTATCCCATGGACACCTACAGCGACGGC CTCAGGCCCCCCTACCCCGCTGCAGACCACATGCTGGCCTAGCTGGCTGGACCCCAGCGC TGTTCCCCATCTGAGAGGCTCTCCGTGCAGGCGATGGGACGAGATAGCAAAGTGCCTGAG |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 3-146, gnl|bosTau2|chr23 (192241-192383) | |
| 3-146, gnl|canFam2|chr9 (24370309-24370126) | |
| 3-146, gnl|danRer3|chrNA (191447265-191447424) | |
| 3-146, gnl|dasNov1|scaffold_10924 (18600-18771) | |
| 3-146, gnl|echTel1|scaffold_48566 (924-846) | |
| 3-146, gnl|fr1|chrUn (272396831-272396998) | |
| 3-146, gnl|galGal2|chr2 (42553234-42553069) | |
| 3-146, gnl|hg17|chr17 (37167405-37167572) | |
| 3-146, gnl|Hg17|chr17 (37167556-37167414) | |
| 3-146, gnl|loxAfr1|scaffold_14180 (50830-51008) | |
| 3-146, gnl|mm7|chr11 (100483335-100483524) | |
| 3-146, gnl|Mm7|chr11 (100483509-100483367) | |
| 3-146, gnl|monDom2|scaffold_18 (52015118-52015292) | |
| 3-146, gnl|oryCun1|scaffold_173799 (48406-48572) | |
| 3-146, gnl|panTro1|chr19 (40366878-40367045) | |
| 3-146, gnl|rheMac2|chr16 (51850656-51850823) | |
| 3-146, gnl|rn3|chr10 (89325931-89326108) | |
| 3-146, gnl|tetNig1|chrUn_random (27367093-27367275) | |
| 3-146, gnl|xenTro1|scaffold_394 (645716-645885) | |
| 310-477, gnl|bosTau2|chr23 (193725-193892) | |
| 310-477, gnl|canFam2|chr9 (24371572-24371373) | |
| 310-477, gnl|dasNov1|scaffold_171139 (3617-3804) | |
| 310-477, gnl|echTel1|scaffold_48566 (1227-1038) | |
| 310-477, gnl|hg17|chr17 (37165508-37165706) | |
| 310-477, gnl|Hg17|chr17 (37165674-37165507) | |
| 310-477, gnl|mm7|chr11 (100481335-100481533) | |
| 310-477, gnl|Mm7|chr11 (100481501-100481334) | |
| 310-477, gnl|monDom2|scaffold_18 (52013847-52014045) | |
| 310-477, gnl|panTro1|chr19 (40364980-40365178) | |
| 310-477, gnl|rheMac2|chr16 (51848402-51848600) | |
| 310-477, gnl|rn3|chr10 (89323857-89324059) | |
| 310-477, gnl|xenTro1|scaffold_394 (643187-643358) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-146, gnl|bosTau2|chr23 (192241-192383) | |
| 3-146, gnl|canFam2|chr9 (24370309-24370126) | |
| 3-146, gnl|danRer3|chrNA (191447265-191447424) | |
| 3-146, gnl|dasNov1|scaffold_10924 (18600-18771) | |
| 3-146, gnl|echTel1|scaffold_48566 (924-846) | |
| 3-146, gnl|fr1|chrUn (272396831-272396998) | |
| 3-146, gnl|galGal2|chr2 (42553234-42553069) | |
| 3-146, gnl|hg17|chr17 (37167405-37167572) | |
| 3-146, gnl|Hg17|chr17 (37167556-37167414) | |
| 3-146, gnl|loxAfr1|scaffold_14180 (50830-51008) | |
| 3-146, gnl|mm7|chr11 (100483335-100483524) | |
| 3-146, gnl|Mm7|chr11 (100483509-100483367) | |
| 3-146, gnl|monDom2|scaffold_18 (52015118-52015292) | |
| 3-146, gnl|oryCun1|scaffold_173799 (48406-48572) | |
| 3-146, gnl|panTro1|chr19 (40366878-40367045) | |
| 3-146, gnl|rheMac2|chr16 (51850656-51850823) | |
| 3-146, gnl|rn3|chr10 (89325931-89326108) | |
| 3-146, gnl|tetNig1|chrUn_random (27367093-27367275) | |
| 3-146, gnl|xenTro1|scaffold_394 (645716-645885) | |
| 310-477, gnl|bosTau2|chr23 (193725-193892) | |
| 310-477, gnl|canFam2|chr9 (24371572-24371373) | |
| 310-477, gnl|dasNov1|scaffold_171139 (3617-3804) | |
| 310-477, gnl|echTel1|scaffold_48566 (1227-1038) | |
| 310-477, gnl|hg17|chr17 (37165508-37165706) | |
| 310-477, gnl|Hg17|chr17 (37165674-37165507) | |
| 310-477, gnl|mm7|chr11 (100481335-100481533) | |
| 310-477, gnl|Mm7|chr11 (100481501-100481334) | |
| 310-477, gnl|monDom2|scaffold_18 (52013847-52014045) | |
| 310-477, gnl|panTro1|chr19 (40364980-40365178) | |
| 310-477, gnl|rheMac2|chr16 (51848402-51848600) | |
| 310-477, gnl|rn3|chr10 (89323857-89324059) | |
| 310-477, gnl|xenTro1|scaffold_394 (643187-643358) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| mas (0.210305) | |
| nep (0.183925) | |
| cov (0.132153) | |
| eep (0.122564) | |
| cly (0.120642) | |
| eru (0.120048) | |
| cty (0.10408) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mas (0.210305) | |
| nep (0.183925) | |
| cov (0.132153) | |
| eep (0.122564) | |
| cly (0.120642) | |
| eru (0.120048) | |
| cty (0.10408) |