Ss1.1-reru35c_c6.5
|
ATCTGGGGACAGGTGATTGTCCCAGGTTGGGGAAAGGCCCTTTGATCCTGATGCTCATTG
GAGCTTCTCCTGTAGCAGCTCCAAATACTTGAGGACTACAAGGGTCCCTCTCCCCTGGCA
GGGTTTTGGGGGATCCCTGGGTGTATCAGAGACAGGCAGGATGGGGATGGTGTCTGGTGG
CTGAGTGACTATAAGAGGGAGCCTTTGTAAAGGCTCTCAGGAGGGAGGGAGAGGAACTGG
GCATTCTTCTGTCCCACTTGGATGGGCCGGGCAGAGGCTGGGGCTGTGGATGCATCTGTC
ACCAAAACAGTATCTGTGCCCCACTTTCTCCTCCTCACTGAGGTTCATCCACCACCCCTG
TCTCCTGGGTCTTCTCCCCTTCTTTGGTTTTTCCCAGCTTCAGGATCGAGATGATCAAGG
GGCAGGGGTGGGGGGTGGGTCACTGCCCTTTCTAAGGGCTGCTCCAGTCCCAACATCTCC
CATCTTCGGGATCCTTGGAGGGGCTGGGGGCAGTCCTGGGGCCACACTTCACCCAGGCCC
AGGCCCTGAAATCCTGAGACTGGAGTCCCCCTGCCAGTGGTAACACAGGACGTGTGCGTG
CGCGTGTGCAAGTGTGGGTGTGTGTGTGTATTTGGCTCGTCTCTTTAGGGAATTTGGGAG
TTGGGTCAGAGGTGGTGGGTGATGGATGTCAAGTTCACTAGCACCCAGTAGAGAAAGGAA
TCCGGAGGCGAGGCCTCTAGGGCCCCGGTTGGGGGAGAATCTCAGTGCTGGCGATGGATG
GCGGGGATGGGCCACACCAGGTGGCACTCCTCTGTCCTCAGATGTCCCAAAGGTTGGAGG
ACCTCTCTGTTCACTTCCCACACCGGGGCTCTTTGCAGCGGCGAGCTGACCGGAGCAGGC
TAGGCCACTTTTGTTTCTAATCAGTGTGCAAGGGTTTGAGGCTCTCCTGTGTGTCCACAC
GTACGAGAGAGCCCATCTGTGCACGCGTGCTGTGTTTCCCCACTTCTCTCCTCTCCCACA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATCTGGGGACAGGTGATTGTCCCAGGTTGGGGAAAGGCCCTTTGATCCTGATGCTCATTG
GAGCTTCTCCTGTAGCAGCTCCAAATACTTGAGGACTACAAGGGTCCCTCTCCCCTGGCA
GGGTTTTGGGGGATCCCTGGGTGTATCAGAGACAGGCAGGATGGGGATGGTGTCTGGTGG
CTGAGTGACTATAAGAGGGAGCCTTTGTAAAGGCTCTCAGGAGGGAGGGAGAGGAACTGG
GCATTCTTCTGTCCCACTTGGATGGGCCGGGCAGAGGCTGGGGCTGTGGATGCATCTGTC
ACCAAAACAGTATCTGTGCCCCACTTTCTCCTCCTCACTGAGGTTCATCCACCACCCCTG
TCTCCTGGGTCTTCTCCCCTTCTTTGGTTTTTCCCAGCTTCAGGATCGAGATGATCAAGG
GGCAGGGGTGGGGGGTGGGTCACTGCCCTTTCTAAGGGCTGCTCCAGTCCCAACATCTCC
CATCTTCGGGATCCTTGGAGGGGCTGGGGGCAGTCCTGGGGCCACACTTCACCCAGGCCC
AGGCCCTGAAATCCTGAGACTGGAGTCCCCCTGCCAGTGGTAACACAGGACGTGTGCGTG
CGCGTGTGCAAGTGTGGGTGTGTGTGTGTATTTGGCTCGTCTCTTTAGGGAATTTGGGAG
TTGGGTCAGAGGTGGTGGGTGATGGATGTCAAGTTCACTAGCACCCAGTAGAGAAAGGAA
TCCGGAGGCGAGGCCTCTAGGGCCCCGGTTGGGGGAGAATCTCAGTGCTGGCGATGGATG
GCGGGGATGGGCCACACCAGGTGGCACTCCTCTGTCCTCAGATGTCCCAAAGGTTGGAGG
ACCTCTCTGTTCACTTCCCACACCGGGGCTCTTTGCAGCGGCGAGCTGACCGGAGCAGGC
TAGGCCACTTTTGTTTCTAATCAGTGTGCAAGGGTTTGAGGCTCTCCTGTGTGTCCACAC
GTACGAGAGAGCCCATCTGTGCACGCGTGCTGTGTTTCCCCACTTCTCTCCTCTCCCACA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
73-958, gnl|bosTau2|chr2 (63349376-63348470) |
|
73-958, gnl|canFam2|chr37 (27578805-27579420) |
|
73-958, gnl|dasNov1|scaffold_214031 (96-694) |
|
73-958, gnl|hg17|chr2 (218490416-218491027) |
|
73-958, gnl|Hg17|chr2 (218491355-218490406) |
|
73-958, gnl|loxAfr1|scaffold_42694 (7231-7704) |
|
73-958, gnl|mm7|chr1 (74152873-74153434) |
|
73-958, gnl|Mm7|chr1 (74153648-74152860) |
|
73-958, gnl|monDom2|scaffold_39 (2910321-2909793) |
|
73-958, gnl|rheMac2|chr12 (81611298-81611908) |
|
73-958, gnl|rn3|chr9 (73379012-73379547) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
73-958, gnl|bosTau2|chr2 (63349376-63348470) |
|
73-958, gnl|canFam2|chr37 (27578805-27579420) |
|
73-958, gnl|dasNov1|scaffold_214031 (96-694) |
|
73-958, gnl|hg17|chr2 (218490416-218491027) |
|
73-958, gnl|Hg17|chr2 (218491355-218490406) |
|
73-958, gnl|loxAfr1|scaffold_42694 (7231-7704) |
|
73-958, gnl|mm7|chr1 (74152873-74153434) |
|
73-958, gnl|Mm7|chr1 (74153648-74152860) |
|
73-958, gnl|monDom2|scaffold_39 (2910321-2909793) |
|
73-958, gnl|rheMac2|chr12 (81611298-81611908) |
|
73-958, gnl|rn3|chr9 (73379012-73379547) |
|
eep (0.245128) |
|
nms (0.213858) |
|
nep (0.183925) |
|
gul (0.177588) |
|
nco (0.161734) |
|
cov (0.132153) |
|
eru (0.120048) |
|
ldo (0.0970026) |
|
eep (0.245128) |
|
nms (0.213858) |
|
nep (0.183925) |
|
gul (0.177588) |
|
nco (0.161734) |
|
cov (0.132153) |
|
eru (0.120048) |
|
ldo (0.0970026) |
