Ss1.1-rese08c_b8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATGCGGTGAAGGGCAAGCGGCGCGGCAGCGGCGATGAGTGCCTCGGCAGCCACTGGGGTC TTCGTGCTGTCCCTTTCGGCCATCCCGGTCACCTACGTCTTCAACCACCTGGCTGCCCAG CACGATTCCTGGACAATCGTAGGGGTTGCTGCCCTCATCCTGCTCCTAGTAGCCCTGTTG GCTCGTGTCCTCGTCAAAAGAAAACCACCCCGGGACCCACTGTTTTACGTGTACGCGGTT TTGGGATTTACCAGCGTGGTGAACCTCATCATAGGACTGGAACAGGACGGGATCATTGAC GGGTTCATGACGCACTATCTGAGAGAGGGTGAACCATACCTGAACACTGCATATGGGCAC ATGATCTGCTACTGGGATGGCTCTGCTCATTATCTGATGTACCTGGTGATGGTGGCAGCC ATAGCCTGGGAGGAAAATTATAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATGCGGTGAAGGGCAAGCGGCGCGGCAGCGGCGATGAGTGCCTCGGCAGCCACTGGGGTC TTCGTGCTGTCCCTTTCGGCCATCCCGGTCACCTACGTCTTCAACCACCTGGCTGCCCAG CACGATTCCTGGACAATCGTAGGGGTTGCTGCCCTCATCCTGCTCCTAGTAGCCCTGTTG GCTCGTGTCCTCGTCAAAAGAAAACCACCCCGGGACCCACTGTTTTACGTGTACGCGGTT TTGGGATTTACCAGCGTGGTGAACCTCATCATAGGACTGGAACAGGACGGGATCATTGAC GGGTTCATGACGCACTATCTGAGAGAGGGTGAACCATACCTGAACACTGCATATGGGCAC ATGATCTGCTACTGGGATGGCTCTGCTCATTATCTGATGTACCTGGTGATGGTGGCAGCC ATAGCCTGGGAGGAAAATTATAGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 126-246, gnl|bosTau2|chr21 (18125483-18125364) | |
| 126-246, gnl|canFam2|chr3 (57743618-57743736) | |
| 126-246, gnl|dasNov1|scaffold_86397 (5038-4920) | |
| 126-246, gnl|echTel1|scaffold_105383 (7184-7066) | |
| 126-246, gnl|hg17|chr15 (81572544-81572662) | |
| 126-246, gnl|Hg17|chr15 (81572553-81572672) | |
| 126-246, gnl|loxAfr1|scaffold_2905 (90454-90571) | |
| 126-246, gnl|mm7|chr7 (77736429-77736547) | |
| 126-246, gnl|Mm7|chr7 (77736438-77736564) | |
| 126-246, gnl|monDom2|scaffold_45 (1940288-1940406) | |
| 126-246, gnl|panTro1|chr16 (82375370-82375488) | |
| 126-246, gnl|rheMac2|chr15 (13458631-13458749) | |
| 126-246, gnl|rn3|chr1 (138154223-138154341) | |
| 126-246, gnl|xenTro1|scaffold_613 (140409-140291) | |
| 326-435, gnl|bosTau2|chr21 (18118008-18117899) | |
| 326-435, gnl|canFam2|chr3 (57751175-57751306) | |
| 326-435, gnl|dasNov1|scaffold_21567 (1244-1373) | |
| 326-435, gnl|echTel1|scaffold_288844 (273-404) | |
| 326-435, gnl|fr1|chrUn (66267182-66267305) | |
| 326-435, gnl|hg17|chr15 (81579318-81579449) | |
| 326-435, gnl|Hg17|chr15 (81579332-81579441) | |
| 326-435, gnl|loxAfr1|scaffold_35492 (1189-1320) | |
| 326-435, gnl|mm7|chr7 (77741913-77742044) | |
| 326-435, gnl|Mm7|chr7 (77741927-77742036) | |
| 326-435, gnl|monDom2|scaffold_45 (1951479-1951613) | |
| 326-435, gnl|oryCun1|scaffold_52448 (257-116) | |
| 326-435, gnl|panTro1|chr16 (82382387-82382518) | |
| 326-435, gnl|rheMac2|chr15 (13465062-13465193) | |
| 326-435, gnl|rn3|chr1 (138161710-138161841) | |
| 326-435, gnl|tetNig1|chr5 (9595137-9595255) | |
| 326-435, gnl|xenTro1|scaffold_613 (136559-136426) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 126-246, gnl|bosTau2|chr21 (18125483-18125364) | |
| 126-246, gnl|canFam2|chr3 (57743618-57743736) | |
| 126-246, gnl|dasNov1|scaffold_86397 (5038-4920) | |
| 126-246, gnl|echTel1|scaffold_105383 (7184-7066) | |
| 126-246, gnl|hg17|chr15 (81572544-81572662) | |
| 126-246, gnl|Hg17|chr15 (81572553-81572672) | |
| 126-246, gnl|loxAfr1|scaffold_2905 (90454-90571) | |
| 126-246, gnl|mm7|chr7 (77736429-77736547) | |
| 126-246, gnl|Mm7|chr7 (77736438-77736564) | |
| 126-246, gnl|monDom2|scaffold_45 (1940288-1940406) | |
| 126-246, gnl|panTro1|chr16 (82375370-82375488) | |
| 126-246, gnl|rheMac2|chr15 (13458631-13458749) | |
| 126-246, gnl|rn3|chr1 (138154223-138154341) | |
| 126-246, gnl|xenTro1|scaffold_613 (140409-140291) | |
| 326-435, gnl|bosTau2|chr21 (18118008-18117899) | |
| 326-435, gnl|canFam2|chr3 (57751175-57751306) | |
| 326-435, gnl|dasNov1|scaffold_21567 (1244-1373) | |
| 326-435, gnl|echTel1|scaffold_288844 (273-404) | |
| 326-435, gnl|fr1|chrUn (66267182-66267305) | |
| 326-435, gnl|hg17|chr15 (81579318-81579449) | |
| 326-435, gnl|Hg17|chr15 (81579332-81579441) | |
| 326-435, gnl|loxAfr1|scaffold_35492 (1189-1320) | |
| 326-435, gnl|mm7|chr7 (77741913-77742044) | |
| 326-435, gnl|Mm7|chr7 (77741927-77742036) | |
| 326-435, gnl|monDom2|scaffold_45 (1951479-1951613) | |
| 326-435, gnl|oryCun1|scaffold_52448 (257-116) | |
| 326-435, gnl|panTro1|chr16 (82382387-82382518) | |
| 326-435, gnl|rheMac2|chr15 (13465062-13465193) | |
| 326-435, gnl|rn3|chr1 (138161710-138161841) | |
| 326-435, gnl|tetNig1|chr5 (9595137-9595255) | |
| 326-435, gnl|xenTro1|scaffold_613 (136559-136426) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| cli (0.152812) | |
| cag (0.151194) | |
| nca (0.136874) | |
| ese (0.126502) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cli (0.152812) | |
| cag (0.151194) | |
| nca (0.136874) | |
| ese (0.126502) |