Ss1.1-rese08c_g20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGAAAGTAACATCTACCGGAAACCGCCCATCTACAGGCGATCTGGCGATCTGTCGACGG CAACCAAGAGCAAAACGAGTGAAGACATCAGCCAAGCCTCCAAGTACAGCCCAGGCTACT CGCCAGACCCCTACTACGCTGCGGAGTCTGAGTACTGGACCTACCATGGCTCCCCGAAAG TGCCCCGAGCCAGAAGATTCTCATCGGGAGGAGAGGAGGATGAGTTTGACCGCAGCATGC AGAAGCTCCAGAGCGGAATTGGCCGCCTGATTCTGAAGGAAGAGATGAGGGCCCGGTCCA GCTCCTACGCAGACCCCTGGGCCCCGCCGCGGAGCTCCACCAGCAGCCGGGAGGCCCTGC ACACCGCTGGCTGCGAGCTGTCCCTCAACGGCTCCCCTCGGTCCCACTACCTGGCTGACA GCGATCCCCTCATCTCCAAATCCGCCTCCCTGCCTGCCTACAGAAGAAACGGGCTGCACA GGACGCCCAGCGCGGACCTGTTCCACTACGACAGCATGAATGCCGTCAACTGGGGCATGC GAGAGTACAAGATCTACCCATACGAGCTGCTGCTGGTCACCACGAGAGGAAGAAACCGGC TGCCCAAGGACGTGGACCGGACGCGTTTAGAGCGCCACCTGTCCCAGGAGGAGTTCTACC AGGTCTTCGGCATGACCATCTCCGAGTTTGACCGGCTGGCCCTCTGGAAGAGGAACGAAC TGAAGAAGCAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGAAAGTAACATCTACCGGAAACCGCCCATCTACAGGCGATCTGGCGATCTGTCGACGG CAACCAAGAGCAAAACGAGTGAAGACATCAGCCAAGCCTCCAAGTACAGCCCAGGCTACT CGCCAGACCCCTACTACGCTGCGGAGTCTGAGTACTGGACCTACCATGGCTCCCCGAAAG TGCCCCGAGCCAGAAGATTCTCATCGGGAGGAGAGGAGGATGAGTTTGACCGCAGCATGC AGAAGCTCCAGAGCGGAATTGGCCGCCTGATTCTGAAGGAAGAGATGAGGGCCCGGTCCA GCTCCTACGCAGACCCCTGGGCCCCGCCGCGGAGCTCCACCAGCAGCCGGGAGGCCCTGC ACACCGCTGGCTGCGAGCTGTCCCTCAACGGCTCCCCTCGGTCCCACTACCTGGCTGACA GCGATCCCCTCATCTCCAAATCCGCCTCCCTGCCTGCCTACAGAAGAAACGGGCTGCACA GGACGCCCAGCGCGGACCTGTTCCACTACGACAGCATGAATGCCGTCAACTGGGGCATGC GAGAGTACAAGATCTACCCATACGAGCTGCTGCTGGTCACCACGAGAGGAAGAAACCGGC TGCCCAAGGACGTGGACCGGACGCGTTTAGAGCGCCACCTGTCCCAGGAGGAGTTCTACC AGGTCTTCGGCATGACCATCTCCGAGTTTGACCGGCTGGCCCTCTGGAAGAGGAACGAAC TGAAGAAGCAAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 54 entry(ies) | More info |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
| 45-180, gnl|bosTau2|chr7 (42327384-42327249) | |
| 45-180, gnl|canFam2|chr4 (62906739-62906607) | |
| 45-180, gnl|danRer3|chr14 (59940768-59940638) | |
| 45-180, gnl|dasNov1|scaffold_3521 (43968-43836) | |
| 45-180, gnl|fr1|chrUn (172746581-172746453) | |
| 45-180, gnl|galGal2|chr13 (7810652-7810520) | |
| 45-180, gnl|hg17|chr5 (148604616-148604748) | |
| 45-180, gnl|Hg17|chr5 (148604636-148604771) | |
| 45-180, gnl|mm7|chr18 (62203794-62203662) | |
| 45-180, gnl|Mm7|chr18 (62203772-62203637) | |
| 45-180, gnl|monDom2|scaffold_6 (22928461-22928594) | |
| 45-180, gnl|oryCun1|scaffold_210246 (552411-552543) | |
| 45-180, gnl|panTro1|chr4 (155499787-155499919) | |
| 45-180, gnl|rheMac2|chr6 (145719512-145719644) | |
| 45-180, gnl|rn3|chr18 (57867235-57867103) | |
| 45-180, gnl|xenTro1|scaffold_493 (475401-475531) | |
| 244-393, gnl|bosTau2|chr7 (42319315-42319166) | |
| 244-393, gnl|canFam2|chr4 (62903828-62903661) | |
| 244-393, gnl|danRer3|chr14 (59930921-59930758) | |
| 244-393, gnl|dasNov1|scaffold_3521 (40547-40380) | |
| 244-393, gnl|echTel1|scaffold_56749 (3848-3681) | |
| 244-393, gnl|fr1|chrUn (172745983-172745807) | |
| 244-393, gnl|galGal2|chr13 (7810058-7809894) | |
| 244-393, gnl|hg17|chr5 (148607534-148607701) | |
| 244-393, gnl|Hg17|chr5 (148607536-148607685) | |
| 244-393, gnl|loxAfr1|scaffold_7834 (25153-25320) | |
| 244-393, gnl|mm7|chr18 (62200903-62200736) | |
| 244-393, gnl|Mm7|chr18 (62200899-62200750) | |
| 244-393, gnl|monDom2|scaffold_6 (22935386-22935543) | |
| 244-393, gnl|oryCun1|scaffold_210246 (554866-555033) | |
| 244-393, gnl|panTro1|chr4 (155502700-155502867) | |
| 244-393, gnl|rheMac2|chr6 (145722447-145722614) | |
| 244-393, gnl|rn3|chr18 (57864413-57864246) | |
| 244-393, gnl|tetNig1|chr7 (9562594-9562753) | |
| 244-393, gnl|xenTro1|scaffold_493 (478886-479046) | |
| 631-732, gnl|bosTau2|chr7 (42309358-42309257) | |
| 631-732, gnl|canFam2|chr4 (62894512-62894391) | |
| 631-732, gnl|danRer3|chr14 (59918237-59918116) | |
| 631-732, gnl|dasNov1|scaffold_10541 (2610-2731) | |
| 631-732, gnl|echTel1|scaffold_62926 (901-780) | |
| 631-732, gnl|fr1|chrUn (172743767-172743638) | |
| 631-732, gnl|galGal2|chr13 (7807714-7807593) | |
| 631-732, gnl|hg17|chr5 (148618030-148618162) | |
| 631-732, gnl|Hg17|chr5 (148618045-148618146) | |
| 631-732, gnl|loxAfr1|scaffold_7834 (39220-39341) | |
| 631-732, gnl|mm7|chr18 (62190855-62190734) | |
| 631-732, gnl|Mm7|chr18 (62190849-62190748) | |
| 631-732, gnl|monDom2|scaffold_6 (22945493-22945614) | |
| 631-732, gnl|oryCun1|scaffold_210246 (568509-568630) | |
| 631-732, gnl|panTro1|chr4 (155513290-155513422) | |
| 631-732, gnl|rheMac2|chr6 (145732338-145732470) | |
| 631-732, gnl|rn3|chr18 (57854358-57854237) | |
| 631-732, gnl|tetNig1|chr7 (9564917-9565043) | |
| 631-732, gnl|xenTro1|scaffold_493 (485556-485686) |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 45-180, gnl|bosTau2|chr7 (42327384-42327249) | |
| 45-180, gnl|canFam2|chr4 (62906739-62906607) | |
| 45-180, gnl|danRer3|chr14 (59940768-59940638) | |
| 45-180, gnl|dasNov1|scaffold_3521 (43968-43836) | |
| 45-180, gnl|fr1|chrUn (172746581-172746453) | |
| 45-180, gnl|galGal2|chr13 (7810652-7810520) | |
| 45-180, gnl|hg17|chr5 (148604616-148604748) | |
| 45-180, gnl|Hg17|chr5 (148604636-148604771) | |
| 45-180, gnl|mm7|chr18 (62203794-62203662) | |
| 45-180, gnl|Mm7|chr18 (62203772-62203637) | |
| 45-180, gnl|monDom2|scaffold_6 (22928461-22928594) | |
| 45-180, gnl|oryCun1|scaffold_210246 (552411-552543) | |
| 45-180, gnl|panTro1|chr4 (155499787-155499919) | |
| 45-180, gnl|rheMac2|chr6 (145719512-145719644) | |
| 45-180, gnl|rn3|chr18 (57867235-57867103) | |
| 45-180, gnl|xenTro1|scaffold_493 (475401-475531) | |
| 244-393, gnl|bosTau2|chr7 (42319315-42319166) | |
| 244-393, gnl|canFam2|chr4 (62903828-62903661) | |
| 244-393, gnl|danRer3|chr14 (59930921-59930758) | |
| 244-393, gnl|dasNov1|scaffold_3521 (40547-40380) | |
| 244-393, gnl|echTel1|scaffold_56749 (3848-3681) | |
| 244-393, gnl|fr1|chrUn (172745983-172745807) | |
| 244-393, gnl|galGal2|chr13 (7810058-7809894) | |
| 244-393, gnl|hg17|chr5 (148607534-148607701) | |
| 244-393, gnl|Hg17|chr5 (148607536-148607685) | |
| 244-393, gnl|loxAfr1|scaffold_7834 (25153-25320) | |
| 244-393, gnl|mm7|chr18 (62200903-62200736) | |
| 244-393, gnl|Mm7|chr18 (62200899-62200750) | |
| 244-393, gnl|monDom2|scaffold_6 (22935386-22935543) | |
| 244-393, gnl|oryCun1|scaffold_210246 (554866-555033) | |
| 244-393, gnl|panTro1|chr4 (155502700-155502867) | |
| 244-393, gnl|rheMac2|chr6 (145722447-145722614) | |
| 244-393, gnl|rn3|chr18 (57864413-57864246) | |
| 244-393, gnl|tetNig1|chr7 (9562594-9562753) | |
| 244-393, gnl|xenTro1|scaffold_493 (478886-479046) | |
| 631-732, gnl|bosTau2|chr7 (42309358-42309257) | |
| 631-732, gnl|canFam2|chr4 (62894512-62894391) | |
| 631-732, gnl|danRer3|chr14 (59918237-59918116) | |
| 631-732, gnl|dasNov1|scaffold_10541 (2610-2731) | |
| 631-732, gnl|echTel1|scaffold_62926 (901-780) | |
| 631-732, gnl|fr1|chrUn (172743767-172743638) | |
| 631-732, gnl|galGal2|chr13 (7807714-7807593) | |
| 631-732, gnl|hg17|chr5 (148618030-148618162) | |
| 631-732, gnl|Hg17|chr5 (148618045-148618146) | |
| 631-732, gnl|loxAfr1|scaffold_7834 (39220-39341) | |
| 631-732, gnl|mm7|chr18 (62190855-62190734) | |
| 631-732, gnl|Mm7|chr18 (62190849-62190748) | |
| 631-732, gnl|monDom2|scaffold_6 (22945493-22945614) | |
| 631-732, gnl|oryCun1|scaffold_210246 (568509-568630) | |
| 631-732, gnl|panTro1|chr4 (155513290-155513422) | |
| 631-732, gnl|rheMac2|chr6 (145732338-145732470) | |
| 631-732, gnl|rn3|chr18 (57854358-57854237) | |
| 631-732, gnl|tetNig1|chr7 (9564917-9565043) | |
| 631-732, gnl|xenTro1|scaffold_493 (485556-485686) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.271592) | |
| ese (0.126502) | |
| eru (0.120048) |