Non-Coding RNA Search

Ss1.1-rese08c_p8.5

Sequence:


               
               GTCATGTCTCTATCCCACTTGTACCGGGACGGAGAAGGCCACATGGATGATGACGAGGAT
GAGCGGGAGAACTTTGAGATCACCGACTGGGATCTCCAGAATGAATTCAACCCTAACCGG
CAGCGCCACTGGCAGACCAAGGAAGAGGCCACCTACGGAGTGTGGGCAGAGCGTGACTCA
GATGAAGAGAGGCCCAGCTTTGGAGGCAAACGGGCTCGTGACTACTCGGCACCAGTCAAC
TTCATCAGTGCTGGGCTCAAGAAAGGGGCAGCAGAGGAGGCGGAGCTGGAAGATTCTGAT
GATGAAGAGAAACCTGTTAAGCAGGATGAATTTCCTAAGGATTTTGGACCAAAGAAGTTA
AAAACGGGTGGTAACTTTAAACCCAGTCAGAAAGGTTTTGCAGGAGGAACCAAGTCGTTC
ATGGATTTTGGCAGCTGGGAAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCATGTCTCTATCCCACTTGTACCGGGACGGAGAAGGCCACATGGATGATGACGAGGAT
GAGCGGGAGAACTTTGAGATCACCGACTGGGATCTCCAGAATGAATTCAACCCTAACCGG
CAGCGCCACTGGCAGACCAAGGAAGAGGCCACCTACGGAGTGTGGGCAGAGCGTGACTCA
GATGAAGAGAGGCCCAGCTTTGGAGGCAAACGGGCTCGTGACTACTCGGCACCAGTCAAC
TTCATCAGTGCTGGGCTCAAGAAAGGGGCAGCAGAGGAGGCGGAGCTGGAAGATTCTGAT
GATGAAGAGAAACCTGTTAAGCAGGATGAATTTCCTAAGGATTTTGGACCAAAGAAGTTA
AAAACGGGTGGTAACTTTAAACCCAGTCAGAAAGGTTTTGCAGGAGGAACCAAGTCGTTC
ATGGATTTTGGCAGCTGGGAAAGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61882569|ref|XP_599620.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61882569|ref|XP_599620.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-213, gnl|bosTau2|chr14 (9541092-9540882)
               

               
               3-213, gnl|Hg17|chr22 (25230793-25230583)
               

               
               3-213, gnl|Mm7|chr5 (111514473-111514686)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-213, gnl|bosTau2|chr14 (9541092-9540882)
               

               
               3-213, gnl|Hg17|chr22 (25230793-25230583)
               

               
               3-213, gnl|Mm7|chr5 (111514473-111514686)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ill (0.175593)
               

               
               ese (0.126502)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)
               

               
               ese (0.126502)

	3-213, gnl\|bosTau2\|chr14 (9541092-9540882)
	3-213, gnl\|Hg17\|chr22 (25230793-25230583)
	3-213, gnl\|Mm7\|chr5 (111514473-111514686)