Non-Coding RNA Search

Ss1.1-rese10c_g24.5

Sequence:


               
               GCCACTTCCACAGTGCCTTCAAGAGCACACCCCACAACCCAGGTCCCGTCAGCCAAGGCA
CTCCGGGCACCGCCAGCGCTGTACTCTTCCTTGGCAAACTGCAGAGGACACTGCAACGGA
CCCGGGCCCAGGCAGATGGGGAGGACGCAGGTGGCAAGAAGCCCCGCCTGGAGATAAACA
CACACGGGTTGGACAGTCCCTTCCACGAGGTCGAGGCTGACACTCCAGGTACCAAGGAGC
CATATGTCCCAGAGCCCAGTCCCCCTGTGACACCCCCATCCGAACCCCAGGAGGCCAGTG
CTGAGGACCTGTGTGCGCTCTGCGGCCAACACCTCTACATCCTAGAACGCCTCAGTGTTG
AGGGCCGTTTCTTCCACCGGAGCTGCTTCCGCTGCTGGGTCTGTGAGGTCACACTGTGGC
CAGGGGCCTACGGGCAGCACCCAGAAGATGGACATTTCTACTGCCTCCAGCACCTACCCC
AGCCAGGCCACAAAGAGGACAGTGGCCACAGAGGTCCTGCAAGTCAGGACCTTCCCACAC
CACAAGGGGTCTGAAAGTAAGGCCTTTCCAAAACCAGGGGGGATTACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCACTTCCACAGTGCCTTCAAGAGCACACCCCACAACCCAGGTCCCGTCAGCCAAGGCA
CTCCGGGCACCGCCAGCGCTGTACTCTTCCTTGGCAAACTGCAGAGGACACTGCAACGGA
CCCGGGCCCAGGCAGATGGGGAGGACGCAGGTGGCAAGAAGCCCCGCCTGGAGATAAACA
CACACGGGTTGGACAGTCCCTTCCACGAGGTCGAGGCTGACACTCCAGGTACCAAGGAGC
CATATGTCCCAGAGCCCAGTCCCCCTGTGACACCCCCATCCGAACCCCAGGAGGCCAGTG
CTGAGGACCTGTGTGCGCTCTGCGGCCAACACCTCTACATCCTAGAACGCCTCAGTGTTG
AGGGCCGTTTCTTCCACCGGAGCTGCTTCCGCTGCTGGGTCTGTGAGGTCACACTGTGGC
CAGGGGCCTACGGGCAGCACCCAGAAGATGGACATTTCTACTGCCTCCAGCACCTACCCC
AGCCAGGCCACAAAGAGGACAGTGGCCACAGAGGTCCTGCAAGTCAGGACCTTCCCACAC
CACAAGGGGTCTGAAAGTAAGGCCTTTCCAAAACCAGGGGGGATTACA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               292-451, gnl|bosTau2|chr9 (23077421-23077262)
               

               
               292-451, gnl|Hg17|chr6 (109875127-109874968)
               

               
               292-451, gnl|Mm7|chr10 (41295035-41295194)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               292-451, gnl|bosTau2|chr9 (23077421-23077262)
               

               
               292-451, gnl|Hg17|chr6 (109875127-109874968)
               

               
               292-451, gnl|Mm7|chr10 (41295035-41295194)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ese (0.126502)
               

               
               cty (0.10408)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)
               

               
               cty (0.10408)

	292-451, gnl\|bosTau2\|chr9 (23077421-23077262)
	292-451, gnl\|Hg17\|chr6 (109875127-109874968)
	292-451, gnl\|Mm7\|chr10 (41295035-41295194)