Non-Coding RNA Search

Ss1.1-rese12c_e10.5

Sequence:


               
               AAATCTAAAAAAAAAAAAAAAAAAAAAACAAACCAAAAACCTTTCTCAACTTCCCACCCT
CCTAAAGTGGCCCCCATTCCCATCTTGGCCTGAGAAGACCTGGGCTAGACAGCTGTCCCC
CCGTCCCCCGCCCAGCCTAGCCTGCTCTAAGGAGCTGGCAGGACTGGAGTTGACAGATGG
ACCCCTCTTGGCCTCTGTCCCAGCTCCCTGCAGCCAGATGGAGAGGCGGCTGCTTGCTTC
TCCATCCCCCAAAGAGCCCCTGAGACCTCCCCCGCCCTCTTCCAGGGTGAGGGGAAGCTG
GAGCTCCAAACTTTGATCCTCCATTGGAGTGGCCCAAATCTTTTCCATCTGGGGTGAGCA
CCCAAGAGGCCCAAGAACCCCTTCCCTGCTTTGGCCTTGGCCTCCATCCTGCATCCCTTT
GCTGGGGATGCTGGGGAGGAGGAGATCCGGTTTATCCTGCCTGGGGAAGGGAAAACATGA
GAGTTGCTCTGGAGGTCAAGACCACCCCCACCCCCTACCCCAGAACAGAACCGTGTCTCT
GATAAAGGTTTTGAAGTGAATAAAGTTTTAAAAGCTAAAAAAAAAAAAAGTGAATAAAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATCTAAAAAAAAAAAAAAAAAAAAAACAAACCAAAAACCTTTCTCAACTTCCCACCCT
CCTAAAGTGGCCCCCATTCCCATCTTGGCCTGAGAAGACCTGGGCTAGACAGCTGTCCCC
CCGTCCCCCGCCCAGCCTAGCCTGCTCTAAGGAGCTGGCAGGACTGGAGTTGACAGATGG
ACCCCTCTTGGCCTCTGTCCCAGCTCCCTGCAGCCAGATGGAGAGGCGGCTGCTTGCTTC
TCCATCCCCCAAAGAGCCCCTGAGACCTCCCCCGCCCTCTTCCAGGGTGAGGGGAAGCTG
GAGCTCCAAACTTTGATCCTCCATTGGAGTGGCCCAAATCTTTTCCATCTGGGGTGAGCA
CCCAAGAGGCCCAAGAACCCCTTCCCTGCTTTGGCCTTGGCCTCCATCCTGCATCCCTTT
GCTGGGGATGCTGGGGAGGAGGAGATCCGGTTTATCCTGCCTGGGGAAGGGAAAACATGA
GAGTTGCTCTGGAGGTCAAGACCACCCCCACCCCCTACCCCAGAACAGAACCGTGTCTCT
GATAAAGGTTTTGAAGTGAATAAAGTTTTAAAAGCTAAAAAAAAAAAAAGTGAATAAAGT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               342-586, gnl|bosTau2|chr18 (7313870-7314104)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               342-586, gnl|bosTau2|chr18 (7313870-7314104)

Expressed library(ies): 12 entry(ies)

More info

Expressed library(ies): 12 entry(ies)

Help | Less info


               
               nms (0.427716)
               

               
               eli (0.303628)
               

               
               nbm (0.297974)
               

               
               hea (0.204499)
               

               
               fcc (0.197785)
               

               
               eye (0.170503)
               

               
               fhi (0.169578)
               

               
               cst (0.140036)
               

               
               ese (0.126502)
               

               
               eep (0.122564)
               

               
               pgl (0.118483)
               

               
               med (0.116252)

Expressed library(ies): 12 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nms (0.427716)
               

               
               eli (0.303628)
               

               
               nbm (0.297974)
               

               
               hea (0.204499)
               

               
               fcc (0.197785)
               

               
               eye (0.170503)
               

               
               fhi (0.169578)
               

               
               cst (0.140036)
               

               
               ese (0.126502)
               

               
               eep (0.122564)
               

               
               pgl (0.118483)
               

               
               med (0.116252)

	nms (0.427716)
	eli (0.303628)
	nbm (0.297974)
	hea (0.204499)
	fcc (0.197785)
	eye (0.170503)
	fhi (0.169578)
	cst (0.140036)
	ese (0.126502)
	eep (0.122564)
	pgl (0.118483)
	med (0.116252)