Non-Coding RNA Search

Ss1.1-rese15c_p11.5

Sequence:


               
               GGAGCGAGGTACCTTCCGCTTCCTCGGGCCGGGGTCCCGGGAGCGCCATGGAGCCTCGGG
CGGTAGTGGATGCTATAGAGACGGGGGAGGAGGACGTGGTTATGGAGGCTCTGCGCGCCT
ACAACCGGGAGAACTCCCAGAGCTTCACGTTTGACGATGCCCAACAGGAGGACAGGAAGA
GACTGGCGGAGCTGCTGGTCTCAGTCCTGGAGCAGGGCTTGTCACCTTCCCGCCGAGTCA
TCTGGCTGCAGAGCATCCGCATCCTGTCGAGGGACCGCAGCTGCCTGGACTCGTTCACCA
GCCGCCAGAGCCTGCAAGCGCTTGCCTGCTATGCTGGCATCTCTGCTTCGAAGGGGTCGT
GTCCTGAGACTCTGGACATGGATGTTGTGCTCGAGTCCCTTAAGTGCCTGTGCAACCTCG
TGCTGAGCAGCTCCGTGGCACAGGTGCTCGCCGCAGAGGCGGGGCTAGTGGTGAGGCTCG
CAGAGCGAGTGAGACTGTACCGCCAGAGCAGCTTCCCGCATGACGTCCAGTTCTTTGACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGCGAGGTACCTTCCGCTTCCTCGGGCCGGGGTCCCGGGAGCGCCATGGAGCCTCGGG
CGGTAGTGGATGCTATAGAGACGGGGGAGGAGGACGTGGTTATGGAGGCTCTGCGCGCCT
ACAACCGGGAGAACTCCCAGAGCTTCACGTTTGACGATGCCCAACAGGAGGACAGGAAGA
GACTGGCGGAGCTGCTGGTCTCAGTCCTGGAGCAGGGCTTGTCACCTTCCCGCCGAGTCA
TCTGGCTGCAGAGCATCCGCATCCTGTCGAGGGACCGCAGCTGCCTGGACTCGTTCACCA
GCCGCCAGAGCCTGCAAGCGCTTGCCTGCTATGCTGGCATCTCTGCTTCGAAGGGGTCGT
GTCCTGAGACTCTGGACATGGATGTTGTGCTCGAGTCCCTTAAGTGCCTGTGCAACCTCG
TGCTGAGCAGCTCCGTGGCACAGGTGCTCGCCGCAGAGGCGGGGCTAGTGGTGAGGCTCG
CAGAGCGAGTGAGACTGTACCGCCAGAGCAGCTTCCCGCATGACGTCCAGTTCTTTGACT

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               18-131, gnl|bosTau2|chr29 (45602795-45602682)
               

               
               18-131, gnl|Hg17|chr11 (198839-198938)
               

               
               18-131, gnl|Mm7|chr7 (137274707-137274817)
               


               
               178-540, gnl|bosTau2|chr29 (45602256-45601894)
               

               
               178-540, gnl|Hg17|chr11 (199405-199767)
               

               
               178-540, gnl|Mm7|chr7 (137275243-137275605)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-131, gnl|bosTau2|chr29 (45602795-45602682)
               

               
               18-131, gnl|Hg17|chr11 (198839-198938)
               

               
               18-131, gnl|Mm7|chr7 (137274707-137274817)
               


               
               178-540, gnl|bosTau2|chr29 (45602256-45601894)
               

               
               178-540, gnl|Hg17|chr11 (199405-199767)
               

               
               178-540, gnl|Mm7|chr7 (137275243-137275605)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ese (0.126502)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	18-131, gnl\|bosTau2\|chr29 (45602795-45602682)
	18-131, gnl\|Hg17\|chr11 (198839-198938)
	18-131, gnl\|Mm7\|chr7 (137274707-137274817)

	178-540, gnl\|bosTau2\|chr29 (45602256-45601894)
	178-540, gnl\|Hg17\|chr11 (199405-199767)
	178-540, gnl\|Mm7\|chr7 (137275243-137275605)