Non-Coding RNA Search

Ss1.1-rese23c_e23.5.5

Sequence:


               
               ATAGCACATACTCATGATGAAATATTCAAATTGTTCAGTACAGTAGATGATGAAAACGGA
GTTACTTCAAATAACTCTGCAGGAGGAACAATTACCAGCACTTTTTTTTATAATTTTCTA
GAAAATTCTTATGTGCCTATGTCATATCTGTATGTGCATAGTATATGTATACATTCATAC
ACATATCCTTGTCAAGACACAAATAGGAACATACTGTAATTCTGTACTTACAGAAAGCTA
ATATATCTTGGAGATCTTTTATATGAATACAAGCAGAGCTACCTCATTTTTCTTAATGGT
TACATAAAATTCCATTGTGTGTAATGGAATTTAACTTAATTAACCAAAACCCTAGTGGTG
GACATTTGGTTTAAGTTTCGTTTATTTTGCTGTTATAAACAATACTACATAGAATGTTTC
TTGTGGATATATCTCTTCGTATGTGCTTGGATATATTTGTAGATAATTTCCTTGAGAGAA
ATTGCCAGGTCAAAGGGTTTGTGCATTTTTATTATTGATTTATATATCAAATTGTATCAT
TTATGTTCCCTCCAACCCTCTTTGAAGTGCTTTTCCTTTTATTTTAATATCTGTAGGATG
CCAACCTCATGTTAGCTAATATAAGATTATAATAAGAATTTAACTATTTAATAAAACTGA
ATTTATATTTTTCTTTCATGTTTATATGTGTATGTGTATATGTGTGTGTGTGAGAGAGAG
AGGGAGGACACAAATGTGAGGACATAAACTTGTTCTGAACTTGTTGTATCTCTATAGAAG
TATTGATGTCTGGTGCCTAATAGTTTTACAGATATGATAAACTGGAGGTGTGTATTTTTA
TGCTGTATATTTTATTGTGATGTATTTATCAAATAACAAGTGTTTATTGGCTATGTAGCC
AGCTAAATATGCATTATTGAGGACTTGGGATATCTACAAAATATGGTTTATGTGCTAAGA
GAATAGCCATGGGATGACATGTCCTTTCCTCTATTTTTCTATGGAATAAAATATTGGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAGCACATACTCATGATGAAATATTCAAATTGTTCAGTACAGTAGATGATGAAAACGGA
GTTACTTCAAATAACTCTGCAGGAGGAACAATTACCAGCACTTTTTTTTATAATTTTCTA
GAAAATTCTTATGTGCCTATGTCATATCTGTATGTGCATAGTATATGTATACATTCATAC
ACATATCCTTGTCAAGACACAAATAGGAACATACTGTAATTCTGTACTTACAGAAAGCTA
ATATATCTTGGAGATCTTTTATATGAATACAAGCAGAGCTACCTCATTTTTCTTAATGGT
TACATAAAATTCCATTGTGTGTAATGGAATTTAACTTAATTAACCAAAACCCTAGTGGTG
GACATTTGGTTTAAGTTTCGTTTATTTTGCTGTTATAAACAATACTACATAGAATGTTTC
TTGTGGATATATCTCTTCGTATGTGCTTGGATATATTTGTAGATAATTTCCTTGAGAGAA
ATTGCCAGGTCAAAGGGTTTGTGCATTTTTATTATTGATTTATATATCAAATTGTATCAT
TTATGTTCCCTCCAACCCTCTTTGAAGTGCTTTTCCTTTTATTTTAATATCTGTAGGATG
CCAACCTCATGTTAGCTAATATAAGATTATAATAAGAATTTAACTATTTAATAAAACTGA
ATTTATATTTTTCTTTCATGTTTATATGTGTATGTGTATATGTGTGTGTGTGAGAGAGAG
AGGGAGGACACAAATGTGAGGACATAAACTTGTTCTGAACTTGTTGTATCTCTATAGAAG
TATTGATGTCTGGTGCCTAATAGTTTTACAGATATGATAAACTGGAGGTGTGTATTTTTA
TGCTGTATATTTTATTGTGATGTATTTATCAAATAACAAGTGTTTATTGGCTATGTAGCC
AGCTAAATATGCATTATTGAGGACTTGGGATATCTACAAAATATGGTTTATGTGCTAAGA
GAATAGCCATGGGATGACATGTCCTTTCCTCTATTTTTCTATGGAATAAAATATTGGGAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-1020, gnl|bosTau2|chr1 (33521364-33522408)
               

               
               3-1020, gnl|Hg17|chr3 (114124989-114123902)
               

               
               3-1020, gnl|Mm7|chr16 (44572082-44574812)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-1020, gnl|bosTau2|chr1 (33521364-33522408)
               

               
               3-1020, gnl|Hg17|chr3 (114124989-114123902)
               

               
               3-1020, gnl|Mm7|chr16 (44572082-44574812)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               mga (0.160205)
               

               
               ese (0.126502)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mga (0.160205)
               

               
               ese (0.126502)

	3-1020, gnl\|bosTau2\|chr1 (33521364-33522408)
	3-1020, gnl\|Hg17\|chr3 (114124989-114123902)
	3-1020, gnl\|Mm7\|chr16 (44572082-44574812)