Ss1.1-rese24c_e15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGGGCGCTCAGCAGACGACGTAGTTCTTGTGCTCTTCCCGCCTCGCCTTTCTTTTCTT GGTTTCAATCCCTGGTGTTGCAAGCCAATTCCCGGGTCTTGTTAGGCGGGAAACACAGAC TGCATTACCCATGTTTGAAACTGGATTTGCGCGTTTGGGAAGCAAGAATGGGGTTACTCT GCTGGAAAAGCTTGACATTGCAAATAAGGGATTTTTACCCTACGGTTCCACAAGTTCCCA CTAAGTATCTGGTACGCGGAAGAGAGGGACAAGGAAGCACAGAGGCTCAGAACAGTTCGT TGTTCACCTCGTCTTTCTACCACATAATTCTGCCTCTAGAAATACAGGAGAAAGAGTAGC CACGCAAAGCTTCTAGGAACTCCTGGGAGAAGCATTCATAAACTCTTATTGCTGCCAGTT CATCTTGGGGCCTTTCGGTGTGAAGAAATGGATCCTTATCAAATACTTTTGTGAAAGAAC ATTTACATCCTGCTTTATTCCAGAAGAAAAGATTTAAGGGCCAGATGCAGATGGCTGGAG ATGGGTGCAGATCACAGGGATTTCGAAATTCTGAGAAAGCTGCATCGTTGCCTCAAAGTG GAGTGGCTACTGCAAATGGGAAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGGGCGCTCAGCAGACGACGTAGTTCTTGTGCTCTTCCCGCCTCGCCTTTCTTTTCTT GGTTTCAATCCCTGGTGTTGCAAGCCAATTCCCGGGTCTTGTTAGGCGGGAAACACAGAC TGCATTACCCATGTTTGAAACTGGATTTGCGCGTTTGGGAAGCAAGAATGGGGTTACTCT GCTGGAAAAGCTTGACATTGCAAATAAGGGATTTTTACCCTACGGTTCCACAAGTTCCCA CTAAGTATCTGGTACGCGGAAGAGAGGGACAAGGAAGCACAGAGGCTCAGAACAGTTCGT TGTTCACCTCGTCTTTCTACCACATAATTCTGCCTCTAGAAATACAGGAGAAAGAGTAGC CACGCAAAGCTTCTAGGAACTCCTGGGAGAAGCATTCATAAACTCTTATTGCTGCCAGTT CATCTTGGGGCCTTTCGGTGTGAAGAAATGGATCCTTATCAAATACTTTTGTGAAAGAAC ATTTACATCCTGCTTTATTCCAGAAGAAAAGATTTAAGGGCCAGATGCAGATGGCTGGAG ATGGGTGCAGATCACAGGGATTTCGAAATTCTGAGAAAGCTGCATCGTTGCCTCAAAGTG GAGTGGCTACTGCAAATGGGAAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 247-372, gnl|bosTau2|chr11 (51163014-51162887) | |
| 517-624, gnl|bosTau2|chr5 (26454924-26455034) | |
| 517-624, gnl|canFam2|chr27 (8854949-8854195) | |
| 517-624, gnl|canFam2|chr27 (8854445-8854262) | |
| 517-624, gnl|echTel1|scaffold_280279 (43768-44456) | |
| 517-624, gnl|echTel1|scaffold_280279 (44188-44371) | |
| 517-624, gnl|hg17|chr12 (47333555-47334317) | |
| 517-624, gnl|Hg17|chr12 (47334227-47334117) | |
| 517-624, gnl|hg17|chr6 (87534889-87535095) | |
| 517-624, gnl|mm7|chr15 (98505152-98505907) | |
| 517-624, gnl|Mm7|chr15 (98505820-98505716) | |
| 517-624, gnl|mm7|chr7 (68523976-68523794) | |
| 517-624, gnl|monDom2|scaffold_243 (417949-418693) | |
| 517-624, gnl|oryCun1|scaffold_155592 (10095-10819) | |
| 517-624, gnl|oryCun1|scaffold_155592 (10550-10731) | |
| 517-624, gnl|panTro1|chr10 (48447315-48448077) | |
| 517-624, gnl|panTro1|chr5 (89238355-89238561) | |
| 517-624, gnl|rheMac2|chr11 (45775550-45776323) | |
| 517-624, gnl|rheMac2|chr4 (82744172-82744378) | |
| 517-624, gnl|rn3|chr14 (86329791-86329982) | |
| 517-624, gnl|rn3|chr7 (137342540-137343273) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 247-372, gnl|bosTau2|chr11 (51163014-51162887) | |
| 517-624, gnl|bosTau2|chr5 (26454924-26455034) | |
| 517-624, gnl|canFam2|chr27 (8854949-8854195) | |
| 517-624, gnl|canFam2|chr27 (8854445-8854262) | |
| 517-624, gnl|echTel1|scaffold_280279 (43768-44456) | |
| 517-624, gnl|echTel1|scaffold_280279 (44188-44371) | |
| 517-624, gnl|hg17|chr12 (47333555-47334317) | |
| 517-624, gnl|Hg17|chr12 (47334227-47334117) | |
| 517-624, gnl|hg17|chr6 (87534889-87535095) | |
| 517-624, gnl|mm7|chr15 (98505152-98505907) | |
| 517-624, gnl|Mm7|chr15 (98505820-98505716) | |
| 517-624, gnl|mm7|chr7 (68523976-68523794) | |
| 517-624, gnl|monDom2|scaffold_243 (417949-418693) | |
| 517-624, gnl|oryCun1|scaffold_155592 (10095-10819) | |
| 517-624, gnl|oryCun1|scaffold_155592 (10550-10731) | |
| 517-624, gnl|panTro1|chr10 (48447315-48448077) | |
| 517-624, gnl|panTro1|chr5 (89238355-89238561) | |
| 517-624, gnl|rheMac2|chr11 (45775550-45776323) | |
| 517-624, gnl|rheMac2|chr4 (82744172-82744378) | |
| 517-624, gnl|rn3|chr14 (86329791-86329982) | |
| 517-624, gnl|rn3|chr7 (137342540-137343273) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.126502) | |
| pgl (0.118483) |