Non-Coding RNA Search

Ss1.1-rese26c_b19.5

Sequence:


               
               TCAGCACTCTTGTCTCTATGAAGGAAAAGTTTGGCTACTGACAGTAGCATTGCGATGGCC
AGTATTTCCGGTCTATAGGTAAGGAAATCGCATCTCCAGCTCCCGCCCCTCTTCCTCCTG
AGCAAGAGGAAGTCCGCATCCTGTGCCAAAGGTATTGGTGGTTTAGAATGTTGAGAGCCA
TCCTCGGTTGCCTTAGCTCCCTTTGGGTATAGGACACTGAGCCATCCGTGAGTGAGGGTG
CAATGGTTTACAGCAGTCTCCAGGAACACACGAGACTGCGGAAGGAGGCTGAACATTTTC
TCAGATGTTACTAATTGACTAGGAAGATAAACTTTTTTTTTTCCAGATTTTTGGGCAGCT
GATAATTTCATTCTGGATGGGCAGCTTGCACTCACCAATAGACGACTTCTGTTCCTGTAA
ATGGAATGTATACTGAAGAAGTAGGGATATATGTGATAACCACTAAAGGTCTCTTTCAAA
ATCAAACTAATTCCTAGAGCCTTTTTAGTATATGTCTTGGAACTAGTCTTGTGATCTGGC
AGAGGCCGTTTGGTCCTTACGATCTGGACAAACAAAAGACAAGCCCCCTTGTCCTGGTCT
GTTCTAGCAAAGGGATAGAACTTAGATGCAACTCGCACGGTCAGGATCTCACGGACCCGC
TTTGCTTCCACTGGGGAGAGAGATGAAACAGTGGACCCTTAGCCTTCGTGTTCTCCTGAT
GTTTCCACCTTGTAGAACCCCTCAGAGCACATTGTTTGCCAAATCCTGGTGGCAAATACT
TGCACTCAGTATTCACACAGCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGCACTCTTGTCTCTATGAAGGAAAAGTTTGGCTACTGACAGTAGCATTGCGATGGCC
AGTATTTCCGGTCTATAGGTAAGGAAATCGCATCTCCAGCTCCCGCCCCTCTTCCTCCTG
AGCAAGAGGAAGTCCGCATCCTGTGCCAAAGGTATTGGTGGTTTAGAATGTTGAGAGCCA
TCCTCGGTTGCCTTAGCTCCCTTTGGGTATAGGACACTGAGCCATCCGTGAGTGAGGGTG
CAATGGTTTACAGCAGTCTCCAGGAACACACGAGACTGCGGAAGGAGGCTGAACATTTTC
TCAGATGTTACTAATTGACTAGGAAGATAAACTTTTTTTTTTCCAGATTTTTGGGCAGCT
GATAATTTCATTCTGGATGGGCAGCTTGCACTCACCAATAGACGACTTCTGTTCCTGTAA
ATGGAATGTATACTGAAGAAGTAGGGATATATGTGATAACCACTAAAGGTCTCTTTCAAA
ATCAAACTAATTCCTAGAGCCTTTTTAGTATATGTCTTGGAACTAGTCTTGTGATCTGGC
AGAGGCCGTTTGGTCCTTACGATCTGGACAAACAAAAGACAAGCCCCCTTGTCCTGGTCT
GTTCTAGCAAAGGGATAGAACTTAGATGCAACTCGCACGGTCAGGATCTCACGGACCCGC
TTTGCTTCCACTGGGGAGAGAGATGAAACAGTGGACCCTTAGCCTTCGTGTTCTCCTGAT
GTTTCCACCTTGTAGAACCCCTCAGAGCACATTGTTTGCCAAATCCTGGTGGCAAATACT
TGCACTCAGTATTCACACAGCTGC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-804, gnl|bosTau2|chr16 (45024410-45025222)
               

               
               1-804, gnl|Hg17|chr1 (179843965-179844764)
               

               
               1-804, gnl|Mm7|chr1 (153182190-153181416)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-804, gnl|bosTau2|chr16 (45024410-45025222)
               

               
               1-804, gnl|Hg17|chr1 (179843965-179844764)
               

               
               1-804, gnl|Mm7|chr1 (153182190-153181416)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               nep (0.183925)
               

               
               ton (0.1755)
               

               
               ese (0.126502)
               

               
               eru (0.120048)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)
               

               
               ton (0.1755)
               

               
               ese (0.126502)
               

               
               eru (0.120048)

	1-804, gnl\|bosTau2\|chr16 (45024410-45025222)
	1-804, gnl\|Hg17\|chr1 (179843965-179844764)
	1-804, gnl\|Mm7\|chr1 (153182190-153181416)