Ss1.1-rese26c_h22.5
|
GGTGCGGAGCCGGGCTTGCGGCACGGGTTCCGGGCGGTCGCCGCCATGAGCACGGTGGAC
CTTGCCCGCGTGGGAGCGTGTGTCCTGAAGCACGCAGTGACCGGGGAGGCCGTGGAGCTA
CGAAGCCTGTGGCAGGAGCAGGCGTGCGTGGTGGCCGGCCTTCGGCGCTTCGGCTGCATG
GTGTGTCGCTGGATCGCCCGGGACCTCAGCAGCCTCAAGGGGCTCTTGGACCAGCACGGC
GTGCGCCTGGTGGGCGTGGGGCCCGAGGCCCTGGGCCTGCAGGAGTTCCTGGACGGTGGC
TACTTCGCGGGAGATCTCTATCTGGATGAGAGCAAGCAGTTTTACAAGGAGCTGGGCTTC
AAGCGGTACAGCAGTTTGAGCATCCTGCCGGCCGCCCTGGGGAAGCCTGTTCGTGATGTG
GCCGCCAAGGCCAAGGCTGCGGGCATCCAGGGGAATCTGTCCGGGGATCTGCTGCAGAGT
GGAGGGCTGCTGGTGGTGGCCAAAGGTGGTGACAAAGTGCTGCTGCACTTTGTGCAGAAG
TCTCCGGGCGACTACGCCCCCCAGGAGAGCATCTTGCAGGCTCTGTGCATCTCTGCAGAG
GCGGCCTGCACCAGCCAGCCACCCCAGTGTGATGAGGAGGCGTGCTCTAGGTGAAGACCC
CAGGCCCCCATGACTCCCGCCCTGGACACACTGCAAGTTGGGTGTGAAGAAACTCCGGAA
TCTCTGGGCTGGGCTGAACTCCGCCTGGTCTACAGGCAGCATCGAGCATTAAAGGGTGGT
TCCTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGTGCGGAGCCGGGCTTGCGGCACGGGTTCCGGGCGGTCGCCGCCATGAGCACGGTGGAC
CTTGCCCGCGTGGGAGCGTGTGTCCTGAAGCACGCAGTGACCGGGGAGGCCGTGGAGCTA
CGAAGCCTGTGGCAGGAGCAGGCGTGCGTGGTGGCCGGCCTTCGGCGCTTCGGCTGCATG
GTGTGTCGCTGGATCGCCCGGGACCTCAGCAGCCTCAAGGGGCTCTTGGACCAGCACGGC
GTGCGCCTGGTGGGCGTGGGGCCCGAGGCCCTGGGCCTGCAGGAGTTCCTGGACGGTGGC
TACTTCGCGGGAGATCTCTATCTGGATGAGAGCAAGCAGTTTTACAAGGAGCTGGGCTTC
AAGCGGTACAGCAGTTTGAGCATCCTGCCGGCCGCCCTGGGGAAGCCTGTTCGTGATGTG
GCCGCCAAGGCCAAGGCTGCGGGCATCCAGGGGAATCTGTCCGGGGATCTGCTGCAGAGT
GGAGGGCTGCTGGTGGTGGCCAAAGGTGGTGACAAAGTGCTGCTGCACTTTGTGCAGAAG
TCTCCGGGCGACTACGCCCCCCAGGAGAGCATCTTGCAGGCTCTGTGCATCTCTGCAGAG
GCGGCCTGCACCAGCCAGCCACCCCAGTGTGATGAGGAGGCGTGCTCTAGGTGAAGACCC
CAGGCCCCCATGACTCCCGCCCTGGACACACTGCAAGTTGGGTGTGAAGAAACTCCGGAA
TCTCTGGGCTGGGCTGAACTCCGCCTGGTCTACAGGCAGCATCGAGCATTAAAGGGTGGT
TCCTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
|
gi|61555089|gb|AAX46658.1| |
Protein identifier
|
gi|61555089|gb|AAX46658.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
107-313, gnl|bosTau2|chr16 (36419469-36419263) |
|
107-313, gnl|canFam2|chr5 (60433231-60433400) |
|
107-313, gnl|fr1|chrUn (29806561-29806392) |
|
107-313, gnl|hg17|chr1 (2550690-2550859) |
|
107-313, gnl|Hg17|chr1 (2550690-2550896) |
|
107-313, gnl|mm7|chr4 (153888226-153888057) |
|
107-313, gnl|Mm7|chr4 (153888224-153888018) |
|
107-313, gnl|monDom2|scaffold_183 (884544-884713) |
|
107-313, gnl|panTro1|chr1 (2475178-2475347) |
|
107-313, gnl|rheMac2|chr1 (5669547-5669716) |
|
107-313, gnl|rn3|chr5 (171716967-171716798) |
|
107-313, gnl|tetNig1|chr11 (4118156-4118325) |
|
107-313, gnl|xenTro1|scaffold_3402 (12448-12622) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
107-313, gnl|bosTau2|chr16 (36419469-36419263) |
|
107-313, gnl|canFam2|chr5 (60433231-60433400) |
|
107-313, gnl|fr1|chrUn (29806561-29806392) |
|
107-313, gnl|hg17|chr1 (2550690-2550859) |
|
107-313, gnl|Hg17|chr1 (2550690-2550896) |
|
107-313, gnl|mm7|chr4 (153888226-153888057) |
|
107-313, gnl|Mm7|chr4 (153888224-153888018) |
|
107-313, gnl|monDom2|scaffold_183 (884544-884713) |
|
107-313, gnl|panTro1|chr1 (2475178-2475347) |
|
107-313, gnl|rheMac2|chr1 (5669547-5669716) |
|
107-313, gnl|rn3|chr5 (171716967-171716798) |
|
107-313, gnl|tetNig1|chr11 (4118156-4118325) |
|
107-313, gnl|xenTro1|scaffold_3402 (12448-12622) |
|
ese (0.506009) |
|
fbs (0.350693) |
|
hyp (0.285673) |
|
eep (0.245128) |
|
nms (0.213858) |
|
ill (0.175593) |
|
ton (0.1755) |
|
eye (0.170503) |
|
fhi (0.169578) |
|
eru (0.120048) |
|
pgl (0.118483) |
|
ese (0.506009) |
|
fbs (0.350693) |
|
hyp (0.285673) |
|
eep (0.245128) |
|
nms (0.213858) |
|
ill (0.175593) |
|
ton (0.1755) |
|
eye (0.170503) |
|
fhi (0.169578) |
|
eru (0.120048) |
|
pgl (0.118483) |
