Non-Coding RNA Search

Ss1.1-rese28c_l22.5

Sequence:


               
               CGAGCCTTTTCCATGTCCCGGGTAGACGCAGTCCTCCGCACCCTCCACGCCCATGGCCAC
TAGCCTGAGGAGGCCGTCTTTCACCGGCTGTTCTTCCTCCCCTCCGGACGCGGACGACGA
GGGCGTGCGCGGCACTTGCGAAGATGCTTCTCTGTGCAAGCGATTTGCGGTGAGCATTGG
CTACTGGCAGGACCCTTGCATCCCGCATTTGGTGAGACTGTCTAAAGCGAGGAAGGCCCC
CGAAATTAACAGAGGATATTTTGCTCGTGTCCACGGCGTCAGTCAGCTTATCAAGGCATT
TCTACGGAAGACAGGGTGCAACTGTCAAATTCTAAACCTTGGGGCTGGGATGGATACCAC
CTTCTGGAGGTTAAAGGATGTGGATCTTCTACCAAGTACATCTTAGAAAGTCAATGTTCC
AGCGATCATCACGAGGAAGCTGCGCAGCATCAAGTAAGTGTGGCTTTGGCCGGAAGCCAG
AGCCCCGTGGCATCAGAACCAGCTCCTGGCAGACAGCAGGGCTGACTGCGGGAGACCTCA
TGTAGGCACTGCCTTCCTTTCCTGGCCTCCTCCCTCTCTCCCTGGCCCTGGACCCTCATT
GCAGTGTGTCCTGAAGTCTTCAAAATGAAATAGACCCTCTCCTGGGCTTTCTGTCCAAGA
ATGTAATTTCTCTATCATTGAAACAAATGACCTGTCATAGTTTAGTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAGCCTTTTCCATGTCCCGGGTAGACGCAGTCCTCCGCACCCTCCACGCCCATGGCCAC
TAGCCTGAGGAGGCCGTCTTTCACCGGCTGTTCTTCCTCCCCTCCGGACGCGGACGACGA
GGGCGTGCGCGGCACTTGCGAAGATGCTTCTCTGTGCAAGCGATTTGCGGTGAGCATTGG
CTACTGGCAGGACCCTTGCATCCCGCATTTGGTGAGACTGTCTAAAGCGAGGAAGGCCCC
CGAAATTAACAGAGGATATTTTGCTCGTGTCCACGGCGTCAGTCAGCTTATCAAGGCATT
TCTACGGAAGACAGGGTGCAACTGTCAAATTCTAAACCTTGGGGCTGGGATGGATACCAC
CTTCTGGAGGTTAAAGGATGTGGATCTTCTACCAAGTACATCTTAGAAAGTCAATGTTCC
AGCGATCATCACGAGGAAGCTGCGCAGCATCAAGTAAGTGTGGCTTTGGCCGGAAGCCAG
AGCCCCGTGGCATCAGAACCAGCTCCTGGCAGACAGCAGGGCTGACTGCGGGAGACCTCA
TGTAGGCACTGCCTTCCTTTCCTGGCCTCCTCCCTCTCTCCCTGGCCCTGGACCCTCATT
GCAGTGTGTCCTGAAGTCTTCAAAATGAAATAGACCCTCTCCTGGGCTTTCTGTCCAAGA
ATGTAATTTCTCTATCATTGAAACAAATGACCTGTCATAGTTTAGTGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               375-706, gnl|bosTau2|chr25 (22331032-22330712)
               

               
               375-706, gnl|Hg17|chr16 (25058991-25059325)
               

               
               375-706, gnl|Mm7|chr7 (119505499-119505799)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               375-706, gnl|bosTau2|chr25 (22331032-22330712)
               

               
               375-706, gnl|Hg17|chr16 (25058991-25059325)
               

               
               375-706, gnl|Mm7|chr7 (119505499-119505799)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cje (0.165235)
               

               
               ese (0.126502)
               

               
               pgl (0.118483)
               

               
               ldo (0.0970026)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cje (0.165235)
               

               
               ese (0.126502)
               

               
               pgl (0.118483)
               

               
               ldo (0.0970026)

	375-706, gnl\|bosTau2\|chr25 (22331032-22330712)
	375-706, gnl\|Hg17\|chr16 (25058991-25059325)
	375-706, gnl\|Mm7\|chr7 (119505499-119505799)