Non-Coding RNA Search

Ss1.1-rese31c_e14.5

Sequence:


               
               AGTGTATATCCGGAGGCTCAGGAACATCCGTCGAGCCGTTGTCCAGCTCCGGGATCGAAG
CCCTAAAACCGTGGTGGTCATTCGGACAGCCAATGCCCAGGAGTTGGGACCTGAGGTGAG
CCTTTTCAACAGCGACTGGTACAACTTTCAGCTGGACACCATCCTTCGGAAGATGTTCTC
AGGAGTTGGAGTATATCTCGTTGATGCCTGGGAGATGACCCTGGCCCACTATCTACCCCA
CAAGCTGCATCCAGATGAAGTTATTGTGAAGAACCAACTGGACATGTTCCTGTCCTTTGT
GTGCCCCTTGGAGACATAGCTTGCCCTGGAGGGGACTGGAGGAATCATATTCAGTGACCT
TCTCTATCACCGGCACTACAGGAAGTCTATGGGTGGCCCAATGGAGAGATGGCTTCCATT
GATATTGTACAAAATTTTAAAAAGAGCTGGACTTTATATAATGACTTGTAAGGAGCTTAG
AAAAAAAATGCAGATTACATTTATATCTACCTATAGGATATTTTTTCCAATCCTGACCTA
GCCATGGGAGAACCATTATTAACAGCATCTATACACTTTATGGCCCTTGTAACCAAAGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTGTATATCCGGAGGCTCAGGAACATCCGTCGAGCCGTTGTCCAGCTCCGGGATCGAAG
CCCTAAAACCGTGGTGGTCATTCGGACAGCCAATGCCCAGGAGTTGGGACCTGAGGTGAG
CCTTTTCAACAGCGACTGGTACAACTTTCAGCTGGACACCATCCTTCGGAAGATGTTCTC
AGGAGTTGGAGTATATCTCGTTGATGCCTGGGAGATGACCCTGGCCCACTATCTACCCCA
CAAGCTGCATCCAGATGAAGTTATTGTGAAGAACCAACTGGACATGTTCCTGTCCTTTGT
GTGCCCCTTGGAGACATAGCTTGCCCTGGAGGGGACTGGAGGAATCATATTCAGTGACCT
TCTCTATCACCGGCACTACAGGAAGTCTATGGGTGGCCCAATGGAGAGATGGCTTCCATT
GATATTGTACAAAATTTTAAAAAGAGCTGGACTTTATATAATGACTTGTAAGGAGCTTAG
AAAAAAAATGCAGATTACATTTATATCTACCTATAGGATATTTTTTCCAATCCTGACCTA
GCCATGGGAGAACCATTATTAACAGCATCTATACACTTTATGGCCCTTGTAACCAAAGAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-600, gnl|bosTau2|chr11 (21587941-21587342)
               

               
               1-600, gnl|Hg17|chr3 (103023170-103023752)
               

               
               1-600, gnl|Mm7|chr16 (55686118-55685525)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-600, gnl|bosTau2|chr11 (21587941-21587342)
               

               
               1-600, gnl|Hg17|chr3 (103023170-103023752)
               

               
               1-600, gnl|Mm7|chr16 (55686118-55685525)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cbl (0.229595)
               

               
               cmu (0.186393)
               

               
               ese (0.126502)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)
               

               
               cmu (0.186393)
               

               
               ese (0.126502)

	1-600, gnl\|bosTau2\|chr11 (21587941-21587342)
	1-600, gnl\|Hg17\|chr3 (103023170-103023752)
	1-600, gnl\|Mm7\|chr16 (55686118-55685525)