Non-Coding RNA Search

Ss1.1-rese31c_l22.5

Sequence:


               
               TTCTTAACTAAATATTCTTAACTTGATTTCTAGGATCACATTTCTAAGAATAAAGGGAAG
CACTAGAAACTTGCATTATTCTTGCACTTAAAAAAAAGAATTGGTCTGTACACCACAATA
AGGTGTTTAGCAGTAAGTCAAAAATGTGAAAAAAAGAAATCACAGCCTGAGGTAATTTAT
ATAAACAACAACAAAAAAAAAAGGGCTTTAGGGTATTATGGTACTATTTGCCTAGCAGCC
AGGTGGTTATGAAACTTTCATATGCTTTGATACACTGGTGTCAACCATTGTTCCTGAAAG
CTCCTTAAATTGCATAAGTTGTTAGTTTTGAAATTTTTCAAGAATAATCTAGTTGAAAAG
CCTTGGTATTAAAGATACACATAGATTTTGGTGAAGATTGCCAGTATGTAGTGTCATTTG
CTTTCTATTTTTGATCTCAAAAGTGCCTCCTCACTTGTATATTATCTCCATTAAAAGCTT
GACTGCATTCTTTCTAATAAGCAATGAAAAATGGTTTAACTCATGTCATCATGTATCTCC
TTAGATATAGTTGACTAGCTTGATAGTTTTGAATATATAATGTAAATATGCATATATAAG
TTTGTAACTGTTTTTGTTACATCATACCCATGTAATTGGACATATCAGATGATATAAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCTTAACTAAATATTCTTAACTTGATTTCTAGGATCACATTTCTAAGAATAAAGGGAAG
CACTAGAAACTTGCATTATTCTTGCACTTAAAAAAAAGAATTGGTCTGTACACCACAATA
AGGTGTTTAGCAGTAAGTCAAAAATGTGAAAAAAAGAAATCACAGCCTGAGGTAATTTAT
ATAAACAACAACAAAAAAAAAAGGGCTTTAGGGTATTATGGTACTATTTGCCTAGCAGCC
AGGTGGTTATGAAACTTTCATATGCTTTGATACACTGGTGTCAACCATTGTTCCTGAAAG
CTCCTTAAATTGCATAAGTTGTTAGTTTTGAAATTTTTCAAGAATAATCTAGTTGAAAAG
CCTTGGTATTAAAGATACACATAGATTTTGGTGAAGATTGCCAGTATGTAGTGTCATTTG
CTTTCTATTTTTGATCTCAAAAGTGCCTCCTCACTTGTATATTATCTCCATTAAAAGCTT
GACTGCATTCTTTCTAATAAGCAATGAAAAATGGTTTAACTCATGTCATCATGTATCTCC
TTAGATATAGTTGACTAGCTTGATAGTTTTGAATATATAATGTAAATATGCATATATAAG
TTTGTAACTGTTTTTGTTACATCATACCCATGTAATTGGACATATCAGATGATATAAGAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-660, gnl|bosTau2|chr10 (22499689-22500363)
               

               
               1-660, gnl|Hg17|chr15 (36435210-36435885)
               

               
               1-660, gnl|Mm7|chr2 (116922392-116923074)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-660, gnl|bosTau2|chr10 (22499689-22500363)
               

               
               1-660, gnl|Hg17|chr15 (36435210-36435885)
               

               
               1-660, gnl|Mm7|chr2 (116922392-116923074)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               bfe (0.149858)
               

               
               ret (0.128733)
               

               
               ese (0.126502)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bfe (0.149858)
               

               
               ret (0.128733)
               

               
               ese (0.126502)

	1-660, gnl\|bosTau2\|chr10 (22499689-22500363)
	1-660, gnl\|Hg17\|chr15 (36435210-36435885)
	1-660, gnl\|Mm7\|chr2 (116922392-116923074)