Non-Coding RNA Search

Ss1.1-rese34c_j11.5

Sequence:


               
               CAGCATTGAAAGGAGCTGGCTAGGAGTGGCAGGGAGTTGACATCTTGTCTTTTGGGACAT
CTCATGGCTGACACACAGCAGGTCCTCAGGAAAGTTTTGTTTAATAATTGGAGGATGCAG
GCCTGTATCCGGAGGTGGGGATGAGAAGGAGGGAGGGTCGACACTCACAGCCCGCCTCAC
CATCTGGCCCTGGTGTGGAAGAACCACCGCCAGTGAAGCTGGTCTCAGAGCTGACACCCC
TAACTGTCCACGAGGGTGATGATGCCACATTCCGGTGTGAAGTCTCCCCACCAGATGCCG
ATGTCACCTGGCTGCGCAATGGGGCTGTTGTCACCCCAGGGCCCCAGCTAGAGATGGCCC
AGAATGGGTCAAGCCGCACCTTGACCCTGCGAGGCTGCCAGCTTGAGGACGCAGGGACCG
TGACTGCCCGAGCAGGGGGCACAGCCACAAGTGCCCGGCTCCATGTTCGAGAAACGGAGC
TGCTGTTCCTGCAATCGTCTTGTTTCTGAACCTATTCTCCCAGCCCCAACGTGTGCCTCC
AAGTGGAGACTGGCCGAGTGGGTGCAGCAGGGGCCGTGCGCTGGGTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCATTGAAAGGAGCTGGCTAGGAGTGGCAGGGAGTTGACATCTTGTCTTTTGGGACAT
CTCATGGCTGACACACAGCAGGTCCTCAGGAAAGTTTTGTTTAATAATTGGAGGATGCAG
GCCTGTATCCGGAGGTGGGGATGAGAAGGAGGGAGGGTCGACACTCACAGCCCGCCTCAC
CATCTGGCCCTGGTGTGGAAGAACCACCGCCAGTGAAGCTGGTCTCAGAGCTGACACCCC
TAACTGTCCACGAGGGTGATGATGCCACATTCCGGTGTGAAGTCTCCCCACCAGATGCCG
ATGTCACCTGGCTGCGCAATGGGGCTGTTGTCACCCCAGGGCCCCAGCTAGAGATGGCCC
AGAATGGGTCAAGCCGCACCTTGACCCTGCGAGGCTGCCAGCTTGAGGACGCAGGGACCG
TGACTGCCCGAGCAGGGGGCACAGCCACAAGTGCCCGGCTCCATGTTCGAGAAACGGAGC
TGCTGTTCCTGCAATCGTCTTGTTTCTGAACCTATTCTCCCAGCCCCAACGTGTGCCTCC
AAGTGGAGACTGGCCGAGTGGGTGCAGCAGGGGCCGTGCGCTGGGTGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61870358|ref|XP_610386.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61870358|ref|XP_610386.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-526, gnl|bosTau2|chr2 (64344937-64345476)
               

               
               1-526, gnl|Hg17|chr2 (220247152-220246611)
               

               
               1-526, gnl|Mm7|chr1 (75717870-75717325)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-526, gnl|bosTau2|chr2 (64344937-64345476)
               

               
               1-526, gnl|Hg17|chr2 (220247152-220246611)
               

               
               1-526, gnl|Mm7|chr1 (75717870-75717325)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ese (0.126502)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	1-526, gnl\|bosTau2\|chr2 (64344937-64345476)
	1-526, gnl\|Hg17\|chr2 (220247152-220246611)
	1-526, gnl\|Mm7\|chr1 (75717870-75717325)