Non-Coding RNA Search

Ss1.1-rese39c_m12.5.5

Sequence:


               
               AAGAAATCAAGACGACAGAGAGAAATAACTGAAATAACAGAAATCGAGGAAGAATATGAG
ATCGCCAAACACGCTCAGAGAGAGACATCCTCCTCGGTGTCGCGGCTCCTGAGACGCAGG
CGCTCCCTGTCCCCCACGTACATCGAGTTAATGAGGCCAGTGTCCGAGCTGATCCGGCCG
CGGACACAGCCAGCTGAGGAAGATGAAGAGGACGCAGAAAGAAGGTCTCCGACGCCCGAG
AGGACACGCCCACGTTCCCCCAGCCCCGTGTCTAGTGAGCGATCACTGTCAAGGTTTGAG
AGGTCCGCGAGATTTGATATCTTCTCCAGGTACGAGTCCATGAAAGCAGCTTTAAAGACT
CAGAAGACCTCAGAAAGGAAGTATGAGGTCTTAAGCCAGCAGCCTTTTACGCTAGACCAC
GCCCCTCGAATCACACTGAGGATGCGCTCCCACAGGGTGCCTTGTGGCCAAAGCACACGT
TTCATCTTAAACGTTCAGTCGAAGCCAACCGCGGAGGTTAAATGGTACCACAATGGCGTA
AAACTCCAAGAGAGCAGTAAGATCCACTACACCAACACCAGCGGGGTCCTGACCCTGGAA
ATTCTAGACTGCCATATTGATGACAGCGGAACTTACCGTGCTGTGTGCACCAACTACAAA
GGCGAGGCTTCTGACTACGCAACCTTGGACGTCACAGGTGGGTGATTACACCACCTACGC
CTCCCGGCGCAGAGACGAAGATGTGCCGCGATCCGTCTTCCCCGAGCTGACCAGGACGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAAATCAAGACGACAGAGAGAAATAACTGAAATAACAGAAATCGAGGAAGAATATGAG
ATCGCCAAACACGCTCAGAGAGAGACATCCTCCTCGGTGTCGCGGCTCCTGAGACGCAGG
CGCTCCCTGTCCCCCACGTACATCGAGTTAATGAGGCCAGTGTCCGAGCTGATCCGGCCG
CGGACACAGCCAGCTGAGGAAGATGAAGAGGACGCAGAAAGAAGGTCTCCGACGCCCGAG
AGGACACGCCCACGTTCCCCCAGCCCCGTGTCTAGTGAGCGATCACTGTCAAGGTTTGAG
AGGTCCGCGAGATTTGATATCTTCTCCAGGTACGAGTCCATGAAAGCAGCTTTAAAGACT
CAGAAGACCTCAGAAAGGAAGTATGAGGTCTTAAGCCAGCAGCCTTTTACGCTAGACCAC
GCCCCTCGAATCACACTGAGGATGCGCTCCCACAGGGTGCCTTGTGGCCAAAGCACACGT
TTCATCTTAAACGTTCAGTCGAAGCCAACCGCGGAGGTTAAATGGTACCACAATGGCGTA
AAACTCCAAGAGAGCAGTAAGATCCACTACACCAACACCAGCGGGGTCCTGACCCTGGAA
ATTCTAGACTGCCATATTGATGACAGCGGAACTTACCGTGCTGTGTGCACCAACTACAAA
GGCGAGGCTTCTGACTACGCAACCTTGGACGTCACAGGTGGGTGATTACACCACCTACGC
CTCCCGGCGCAGAGACGAAGATGTGCCGCGATCCGTCTTCCCCGAGCTGACCAGGACGGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-224, gnl|bosTau2|chr2 (7872144-7872366)
               

               
               1-224, gnl|Hg17|chr2 (179222448-179222239)
               

               
               1-224, gnl|Mm7|chr2 (76554293-76554084)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-224, gnl|bosTau2|chr2 (7872144-7872366)
               

               
               1-224, gnl|Hg17|chr2 (179222448-179222239)
               

               
               1-224, gnl|Mm7|chr2 (76554293-76554084)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nep (0.183925)
               

               
               hlv (0.139256)
               

               
               ese (0.126502)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)
               

               
               hlv (0.139256)
               

               
               ese (0.126502)

	1-224, gnl\|bosTau2\|chr2 (7872144-7872366)
	1-224, gnl\|Hg17\|chr2 (179222448-179222239)
	1-224, gnl\|Mm7\|chr2 (76554293-76554084)