Non-Coding RNA Search

Ss1.1-rese39c_m13.5

Sequence:


               
               GCTGCAGTGCCAGTTCATAGTAGGTGCTCAGCTAATGCCTGGATCAAAGCTGGTCTCAGA
CCCCAGCGCAGAGTAGGCATTCGACACGGGAGGGTATTGAATCAGGTCTTTACTGCCAGG
CGGACACACACAGGAGGCGCTGGAAGGACGTTTGCAGAATGAATAAATAAACGTGTGCTC
TTTGAGGGGATAAAGCAGCAGAGAAACTAAGAAGAATCCAGGGAAGCTGGACATAAATCT
CCACCAAATGCCACCAAGGCTCCGCAGCCGAGGCCCCTGAAAAGACCCCGTGGAGGCTGC
AGGCCATTCGTCACGGCGGGGACGGGCTGGAGGGCCAGGAAGCAAGGGCTTGATGGAGCG
GCGTTCTTCATTTTCGCATCATCCCGGCGGCAGTGGAGGGCGGCCCACGCGTGTGCAGCC
TCGCCGCCTGCCTGGCGGACTGAGTGCCGGGCTGGGGGTGGGGAAGGACCCGAGGAAGGG
CAGGCACTCGTCTCAGAGCTTCCCCTCATGCCCTTGGTGCCGTAGTTGCTGTGTTCATAC
CTCTGAGTCCCTCCTGCCATTCGTTCCAGATGCACCTGTACCTGTAATGCCTGCCCCTCC
TCCTCCAGGGCTCTGCTCCAGTGCCCATTCCTACAGGAAGCCCTCCCTGATCCACCCTCC
ACACAGAACCTCAGCTTGCAGTCCACTCTCCGTTCTCTGATGCTTTGATTAGCAGGGGCC
AGACTGCCCTGTCCGGATCGCATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGCAGTGCCAGTTCATAGTAGGTGCTCAGCTAATGCCTGGATCAAAGCTGGTCTCAGA
CCCCAGCGCAGAGTAGGCATTCGACACGGGAGGGTATTGAATCAGGTCTTTACTGCCAGG
CGGACACACACAGGAGGCGCTGGAAGGACGTTTGCAGAATGAATAAATAAACGTGTGCTC
TTTGAGGGGATAAAGCAGCAGAGAAACTAAGAAGAATCCAGGGAAGCTGGACATAAATCT
CCACCAAATGCCACCAAGGCTCCGCAGCCGAGGCCCCTGAAAAGACCCCGTGGAGGCTGC
AGGCCATTCGTCACGGCGGGGACGGGCTGGAGGGCCAGGAAGCAAGGGCTTGATGGAGCG
GCGTTCTTCATTTTCGCATCATCCCGGCGGCAGTGGAGGGCGGCCCACGCGTGTGCAGCC
TCGCCGCCTGCCTGGCGGACTGAGTGCCGGGCTGGGGGTGGGGAAGGACCCGAGGAAGGG
CAGGCACTCGTCTCAGAGCTTCCCCTCATGCCCTTGGTGCCGTAGTTGCTGTGTTCATAC
CTCTGAGTCCCTCCTGCCATTCGTTCCAGATGCACCTGTACCTGTAATGCCTGCCCCTCC
TCCTCCAGGGCTCTGCTCCAGTGCCCATTCCTACAGGAAGCCCTCCCTGATCCACCCTCC
ACACAGAACCTCAGCTTGCAGTCCACTCTCCGTTCTCTGATGCTTTGATTAGCAGGGGCC
AGACTGCCCTGTCCGGATCGCATC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               11-485, gnl|bosTau2|chr21 (45768176-45768654)
               

               
               11-485, gnl|Hg17|chr14 (100606411-100606928)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-485, gnl|bosTau2|chr21 (45768176-45768654)
               

               
               11-485, gnl|Hg17|chr14 (100606411-100606928)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ese (0.126502)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	11-485, gnl\|bosTau2\|chr21 (45768176-45768654)
	11-485, gnl\|Hg17\|chr14 (100606411-100606928)