Ss1.1-rese40c_l23.5
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TCAGAGGCTGTGGAGTCGCCTCGCAGCAGCGAGCAGAGAGCGCCCTGCTCCCAGTCCCGG
CTTGGAACTGAACTGTGTGAGTGCGGGTCCTGGAGCCCCGGCCCAGGAGCGGCGAGCCCG
GATCTGAGCCTGGGGAGCAGCGGTCAGCTTCTGAGGCCCTGATTCGGGACCGAGCCGAGG
CGCGGAGCGGGAGAGCCCGGCGGGCCGGCGCAGCGTCCGGCGAGTCAGGGAGCAGGACCG
CGGAAGGCAGGGAGACGGCCGCAAGCAGAGGGCAGAGGGCAGAGTGCAGAGAGCGGCCTG
GCTCGGCGGAGGGCGCCGCCCGGCCGGATCCGAGCTCTCCGCCCGGGACGGCGGCCAGTG
GTGGGGTGAGAAGCCGGGGTGGCCAAGAGTCCCAAGCGACTCCCCGGCTGGCGGCGGGGG
GCGTGCCTCCTCCCAGCCCGGCGCGCCTGTCCGCGGAGTCGCCGGGGCATGTGAGCGGGA
AGCCCAGGCTGCCAGCCGCGAGGACCCGGACGGAGGAGGAGCAGGAGCGCGGAGCCGCGA
GCAGCGATCCCAGAGTCCGGCTGAGTAGATGTCCATGAGGAGTCCCGGCTCTGCCCAGCT
GGCCCTGGATGACGCTGGCACCATGGTGAACTGTACCGTCAAGTCAGAGGGGAAGAAGGA
GCCCTGCCACGAGGCCCCCCAGGGCTCGGCCACCGCAGCTGAACCCCAGCCCGGAGACCC
AGCCCGGGTCCCCCAAGATGGTGCTGACCCTCAAGCTCCAGCCCAGGTGCCCAGCACTCT
GCTAGGGGCTCCTGGGTCAGTGTCCCCACCCCGCTTCTGTAGCCCCATGCATGTGGCCAT
TCCCCGAGTGGGTGGGACAGGCATCCACCAGCCTAGCTGGGCAGAGGGGCTGGCAGAAAT
GTTCTTCTCTGGGCAAGACTTAGATGGGTGGGTGGGTCAGGCTACCTGTCTGAGCAGGAT
CTTGCCCTCATTCATCTGATATTAGCTGCTCACCTATGTGTGACCAGTCCTTACTCTCCA
GGACTAGTTGAGAGATAGGATACACAGGCTCTGAGTCTGGCTTAAATCTGTTAGGCTTTT
TCATATGATTTGTGAAAATCAATCTGATTACCCACACCAGAGTTAACTCACTGTTCAAGA
CAACACAGCTGCTCGTCCTGAAGAAGCTGAATTACACGAGCAGCAAGATTTCTTGCAGCT
CTTAAAAACTCCATGATTCCATGCAAGAGATGTAAAAAGGGAGAATATGATCAAAAGCCA
AGTGAGAGAAAATGGGGAGAGTCTGGGGACTCTGAGAAGGATCCAGCCAGGAGGAATATG
TGAGAGTGGAGT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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TCAGAGGCTGTGGAGTCGCCTCGCAGCAGCGAGCAGAGAGCGCCCTGCTCCCAGTCCCGG
CTTGGAACTGAACTGTGTGAGTGCGGGTCCTGGAGCCCCGGCCCAGGAGCGGCGAGCCCG
GATCTGAGCCTGGGGAGCAGCGGTCAGCTTCTGAGGCCCTGATTCGGGACCGAGCCGAGG
CGCGGAGCGGGAGAGCCCGGCGGGCCGGCGCAGCGTCCGGCGAGTCAGGGAGCAGGACCG
CGGAAGGCAGGGAGACGGCCGCAAGCAGAGGGCAGAGGGCAGAGTGCAGAGAGCGGCCTG
GCTCGGCGGAGGGCGCCGCCCGGCCGGATCCGAGCTCTCCGCCCGGGACGGCGGCCAGTG
GTGGGGTGAGAAGCCGGGGTGGCCAAGAGTCCCAAGCGACTCCCCGGCTGGCGGCGGGGG
GCGTGCCTCCTCCCAGCCCGGCGCGCCTGTCCGCGGAGTCGCCGGGGCATGTGAGCGGGA
AGCCCAGGCTGCCAGCCGCGAGGACCCGGACGGAGGAGGAGCAGGAGCGCGGAGCCGCGA
GCAGCGATCCCAGAGTCCGGCTGAGTAGATGTCCATGAGGAGTCCCGGCTCTGCCCAGCT
GGCCCTGGATGACGCTGGCACCATGGTGAACTGTACCGTCAAGTCAGAGGGGAAGAAGGA
GCCCTGCCACGAGGCCCCCCAGGGCTCGGCCACCGCAGCTGAACCCCAGCCCGGAGACCC
AGCCCGGGTCCCCCAAGATGGTGCTGACCCTCAAGCTCCAGCCCAGGTGCCCAGCACTCT
GCTAGGGGCTCCTGGGTCAGTGTCCCCACCCCGCTTCTGTAGCCCCATGCATGTGGCCAT
TCCCCGAGTGGGTGGGACAGGCATCCACCAGCCTAGCTGGGCAGAGGGGCTGGCAGAAAT
GTTCTTCTCTGGGCAAGACTTAGATGGGTGGGTGGGTCAGGCTACCTGTCTGAGCAGGAT
CTTGCCCTCATTCATCTGATATTAGCTGCTCACCTATGTGTGACCAGTCCTTACTCTCCA
GGACTAGTTGAGAGATAGGATACACAGGCTCTGAGTCTGGCTTAAATCTGTTAGGCTTTT
TCATATGATTTGTGAAAATCAATCTGATTACCCACACCAGAGTTAACTCACTGTTCAAGA
CAACACAGCTGCTCGTCCTGAAGAAGCTGAATTACACGAGCAGCAAGATTTCTTGCAGCT
CTTAAAAACTCCATGATTCCATGCAAGAGATGTAAAAAGGGAGAATATGATCAAAAGCCA
AGTGAGAGAAAATGGGGAGAGTCTGGGGACTCTGAGAAGGATCCAGCCAGGAGGAATATG
TGAGAGTGGAGT
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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568-871, gnl|bosTau2|chr23 (16437546-16437244) |
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568-871, gnl|canFam2|chr38 (3709261-3709549) |
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568-871, gnl|dasNov1|scaffold_9431 (58371-58659) |
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568-871, gnl|echTel1|scaffold_240201 (7346-7632) |
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568-871, gnl|galGal2|chr26 (336825-337098) |
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568-871, gnl|hg17|chr1 (200813674-200813945) |
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568-871, gnl|Hg17|chr1 (200813700-200813992) |
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568-871, gnl|loxAfr1|scaffold_11302 (14808-15089) |
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568-871, gnl|mm7|chr1 (133294230-133293940) |
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568-871, gnl|Mm7|chr1_random (7603585-7603324) |
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568-871, gnl|monDom2|scaffold_13 (4475951-4476255) |
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568-871, gnl|oryCun1|scaffold_202558 (4035-3784) |
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568-871, gnl|panTro1|chr1 (183753966-183754237) |
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568-871, gnl|rheMac2|chr1 (166319049-166318781) |
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568-871, gnl|rn3|chr13 (46323856-46323566) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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568-871, gnl|bosTau2|chr23 (16437546-16437244) |
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568-871, gnl|canFam2|chr38 (3709261-3709549) |
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568-871, gnl|dasNov1|scaffold_9431 (58371-58659) |
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568-871, gnl|echTel1|scaffold_240201 (7346-7632) |
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568-871, gnl|galGal2|chr26 (336825-337098) |
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568-871, gnl|hg17|chr1 (200813674-200813945) |
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568-871, gnl|Hg17|chr1 (200813700-200813992) |
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568-871, gnl|loxAfr1|scaffold_11302 (14808-15089) |
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568-871, gnl|mm7|chr1 (133294230-133293940) |
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568-871, gnl|Mm7|chr1_random (7603585-7603324) |
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568-871, gnl|monDom2|scaffold_13 (4475951-4476255) |
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568-871, gnl|oryCun1|scaffold_202558 (4035-3784) |
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568-871, gnl|panTro1|chr1 (183753966-183754237) |
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568-871, gnl|rheMac2|chr1 (166319049-166318781) |
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568-871, gnl|rn3|chr13 (46323856-46323566) |
