Ss1.1-reye1603b_k7.5
|
GCACTATCTTAATTACTGTAGTCCTTTCATTAGCCTTGAAATCTGGCAAAGCAAGTGTTT
TGATTTTCTTTTTCCTCATTTCTTAAGCTTTTCTTCCTCCATATGCATTTCAGAATTAGT
TTGCACAGTTCCTTGGAGTAAACAAAGAACAATACTTGGGTTTTTTTTGTTTTTTTTTTG
CTGCACCCACGGCATATGGAAGTTCCCAGGCCAGGGATGTTCCCCAGCTAGGGGAAAAAC
CTGTGCCATGGCAGCGACCCAAGCTGTTGCAATGACAATACAAGATCTTTAACCCAATGC
ACCACAAGAGAACTCCAGAAAAATACATGTTAACTGTAAATGCACTACATCAATTTTTGA
GAGAATCGACCTCTTTACATTAATTAATGCCTATTACTAAGCATGATATGTCTCACCTTT
TACATGTGTTAATCCTTTGATAGACAAGTATGAGCACTTTATATATTATTATTACAGTGG
ATGATATTTATTTTTAATTACATGTTCTAACTGATGCTAGTATATAGAAAATACAATTAA
CTTTTGTGTATTTATATTGTATCAGGGAACTTACCCTCTAATTTAATAATTTACCTATAA
ATTCTTTCCCGAAATACTTATATAGGTAGTTTTGTAATCTTACAACTTTTAATCTTACAA
CTTTGTAATGTTCTTACTGGATTTGTTAGGACATTCTGTAAAATACTGAATGGATTTGAT
AATGTGAATGTCTGTGTACTGTTCCTAATGCGAATGGAGTGCTTCTGTATTTTACCACTG
AGCAAATGGATGGATGCTGTGTGTATTTCAGAGATTCACCTAATCAGGATGTGGTAGTCG
CTTCCACTCCCAGTCAATAAGTGACTTTTTATCATCAGTGCATGATGAGATTTAGTCAAT
GCTTTTGCTGCATTTATTGTGATAATCATATGTATGTTTTTTTGCTTTTATCTGTTAATG
TAGTATTTTAGGTGAAATTGTTTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCACTATCTTAATTACTGTAGTCCTTTCATTAGCCTTGAAATCTGGCAAAGCAAGTGTTT
TGATTTTCTTTTTCCTCATTTCTTAAGCTTTTCTTCCTCCATATGCATTTCAGAATTAGT
TTGCACAGTTCCTTGGAGTAAACAAAGAACAATACTTGGGTTTTTTTTGTTTTTTTTTTG
CTGCACCCACGGCATATGGAAGTTCCCAGGCCAGGGATGTTCCCCAGCTAGGGGAAAAAC
CTGTGCCATGGCAGCGACCCAAGCTGTTGCAATGACAATACAAGATCTTTAACCCAATGC
ACCACAAGAGAACTCCAGAAAAATACATGTTAACTGTAAATGCACTACATCAATTTTTGA
GAGAATCGACCTCTTTACATTAATTAATGCCTATTACTAAGCATGATATGTCTCACCTTT
TACATGTGTTAATCCTTTGATAGACAAGTATGAGCACTTTATATATTATTATTACAGTGG
ATGATATTTATTTTTAATTACATGTTCTAACTGATGCTAGTATATAGAAAATACAATTAA
CTTTTGTGTATTTATATTGTATCAGGGAACTTACCCTCTAATTTAATAATTTACCTATAA
ATTCTTTCCCGAAATACTTATATAGGTAGTTTTGTAATCTTACAACTTTTAATCTTACAA
CTTTGTAATGTTCTTACTGGATTTGTTAGGACATTCTGTAAAATACTGAATGGATTTGAT
AATGTGAATGTCTGTGTACTGTTCCTAATGCGAATGGAGTGCTTCTGTATTTTACCACTG
AGCAAATGGATGGATGCTGTGTGTATTTCAGAGATTCACCTAATCAGGATGTGGTAGTCG
CTTCCACTCCCAGTCAATAAGTGACTTTTTATCATCAGTGCATGATGAGATTTAGTCAAT
GCTTTTGCTGCATTTATTGTGATAATCATATGTATGTTTTTTTGCTTTTATCTGTTAATG
TAGTATTTTAGGTGAAATTGTTTT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-158, gnl|bosTau2|chr24 (9439099-9438939) |
|
1-158, gnl|hg17|chr18 (63316604-63317054) |
|
1-158, gnl|Hg17|chr18 (63316835-63316669) |
|
1-158, gnl|panTro1|chr17 (60259863-60260319) |
|
1-158, gnl|rheMac2|chr18 (61057884-61058325) |
| |
|
317-984, gnl|bosTau2|chr24 (9438951-9438280) |
|
317-984, gnl|hg17|chr18 (63315967-63316603) |
|
317-984, gnl|Hg17|chr18 (63316681-63315983) |
|
317-984, gnl|oryCun1|scaffold_199709 (42176-41553) |
|
317-984, gnl|panTro1|chr17 (60259224-60259862) |
|
317-984, gnl|rheMac2|chr18 (61057254-61057883) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-158, gnl|bosTau2|chr24 (9439099-9438939) |
|
1-158, gnl|hg17|chr18 (63316604-63317054) |
|
1-158, gnl|Hg17|chr18 (63316835-63316669) |
|
1-158, gnl|panTro1|chr17 (60259863-60260319) |
|
1-158, gnl|rheMac2|chr18 (61057884-61058325) |
| |
|
317-984, gnl|bosTau2|chr24 (9438951-9438280) |
|
317-984, gnl|hg17|chr18 (63315967-63316603) |
|
317-984, gnl|Hg17|chr18 (63316681-63315983) |
|
317-984, gnl|oryCun1|scaffold_199709 (42176-41553) |
|
317-984, gnl|panTro1|chr17 (60259224-60259862) |
|
317-984, gnl|rheMac2|chr18 (61057254-61057883) |
|
pro (0.512033) |
|
ret (0.3862) |
|
eye (0.170503) |
|
pgl (0.118483) |
|
pro (0.512033) |
|
ret (0.3862) |
|
eye (0.170503) |
|
pgl (0.118483) |
