Non-Coding RNA Search

Ss1.1-reye1605b_c20.5

Sequence:


               
               GTTTTTTTTTTAAACTAAAACATTTTATCAGTAGAAACATTACAAGAAATCCAATAAGTT
AATCTAGGAAATATGTTTAGAGGCCACTTATTTTTCCTCACTGTACCATTTTACTTCATA
CAAAAAGCAAAAATGGTGGCTTATGGTAAATTGTTTTGGAGACACATGACATGGGAAGTA
AGGTTGGATGGTCAAGGGGAAATTTTTTTCTTTTTTCTTTTTTTTTAAACAACATGAGTA
AATGAATAAAGCTGATAGAGTTGAGCATTCTAAAATTAGTTCGAACTTTATGACCACTTT
ATGTAGTTAATTTCATGGTGTCCCTCTTTAAATTAACGTGTATTCAATTATATTTCAAAT
CATCATGGAAGTTCAAACAATTGTCATTTGGATCCACAGATTGAGTGCTAATTGTAGTGG
GGATGCTGCTGGGTGATTTCTGTTAAAGGAGATGCTGTATCTTTATTTTAATTGTATTAG
ATAGCTCTGAACTGTCTAATTGTTTGGGTCATAACAATTGGACAGGTCATAATTGTTATC
ATTTCAACTGGGATTTCTCAGAGCAACTGAGGAAGGCATTTATGTAATACAAATGTTAGG
CTTGGACTTGTAAGACCCTTGAGCCCCTGTATATAAAAGCAACCATCCTTACTTAGCCTT
TAATAAAACTTTGCTTTTTTTTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTTTTTTTAAACTAAAACATTTTATCAGTAGAAACATTACAAGAAATCCAATAAGTT
AATCTAGGAAATATGTTTAGAGGCCACTTATTTTTCCTCACTGTACCATTTTACTTCATA
CAAAAAGCAAAAATGGTGGCTTATGGTAAATTGTTTTGGAGACACATGACATGGGAAGTA
AGGTTGGATGGTCAAGGGGAAATTTTTTTCTTTTTTCTTTTTTTTTAAACAACATGAGTA
AATGAATAAAGCTGATAGAGTTGAGCATTCTAAAATTAGTTCGAACTTTATGACCACTTT
ATGTAGTTAATTTCATGGTGTCCCTCTTTAAATTAACGTGTATTCAATTATATTTCAAAT
CATCATGGAAGTTCAAACAATTGTCATTTGGATCCACAGATTGAGTGCTAATTGTAGTGG
GGATGCTGCTGGGTGATTTCTGTTAAAGGAGATGCTGTATCTTTATTTTAATTGTATTAG
ATAGCTCTGAACTGTCTAATTGTTTGGGTCATAACAATTGGACAGGTCATAATTGTTATC
ATTTCAACTGGGATTTCTCAGAGCAACTGAGGAAGGCATTTATGTAATACAAATGTTAGG
CTTGGACTTGTAAGACCCTTGAGCCCCTGTATATAAAAGCAACCATCCTTACTTAGCCTT
TAATAAAACTTTGCTTTTTTTTAT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               8-678, gnl|bosTau2|chr2 (7936928-7936258)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-678, gnl|bosTau2|chr2 (7936928-7936258)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               aor (0.195274)
               

               
               eye (0.170503)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)
               

               
               eye (0.170503)