Non-Coding RNA Search

Ss1.1-reye1605b_k14.5

Sequence:


               
               TCCTAAAAAGCAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAAAGGCATCTCAGCATA
TATCTTTCAGTTTACATGTTGAAAGGCTTTTACATTAACATTAAAATAGTAAGGAGCCAG
AAGAGAAAAGCATTTTCGTTAAACCAATATTTTTTCTTTATGGAATTTGAGGTATTCTAT
ATGTTGAAAATTACAAAATGATACGGGATGCTGCTGGGGCCCTTGCACACCACGATCAAC
AGCCCTGAGGAGGAAGCTCTGCGTGGGGGTGGCGCTAAGATGCTGTACGAAGAGCTGCAA
CGAGTGAAGGCACAGCCTCCAGGCCAGGGGCTGGACTTGGATGCAGCGCACGTCTTCTGT
CAGTGGCAGAGCTGCCTTCAGATGGGGCTGTATCTCAACCAGCTGCTGTCCTCACCTCTC
CCAGAGCCAGACCTACCTCGACTGTACAGTGGGCGCCTGGTACACGGGCTGTGCCGACAA
CTGCTGACGGCAGCCTCAGTGGAGAGTCTCCTGAGTGCCTGTCCTGAGGCCCAGCAACTC
TATGAACAACTGTTCAACGCCATGAGGTCATATGCCCCTGCTGAACTATTCTTACCAAAG
GGCAAATCAACG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCTAAAAAGCAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAAAGGCATCTCAGCATA
TATCTTTCAGTTTACATGTTGAAAGGCTTTTACATTAACATTAAAATAGTAAGGAGCCAG
AAGAGAAAAGCATTTTCGTTAAACCAATATTTTTTCTTTATGGAATTTGAGGTATTCTAT
ATGTTGAAAATTACAAAATGATACGGGATGCTGCTGGGGCCCTTGCACACCACGATCAAC
AGCCCTGAGGAGGAAGCTCTGCGTGGGGGTGGCGCTAAGATGCTGTACGAAGAGCTGCAA
CGAGTGAAGGCACAGCCTCCAGGCCAGGGGCTGGACTTGGATGCAGCGCACGTCTTCTGT
CAGTGGCAGAGCTGCCTTCAGATGGGGCTGTATCTCAACCAGCTGCTGTCCTCACCTCTC
CCAGAGCCAGACCTACCTCGACTGTACAGTGGGCGCCTGGTACACGGGCTGTGCCGACAA
CTGCTGACGGCAGCCTCAGTGGAGAGTCTCCTGAGTGCCTGTCCTGAGGCCCAGCAACTC
TATGAACAACTGTTCAACGCCATGAGGTCATATGCCCCTGCTGAACTATTCTTACCAAAG
GGCAAATCAACG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5XHY6_RAT

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5XHY6_RAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               42-440, gnl|bosTau2|chr1 (97177450-97177050)
               

               
               42-440, gnl|Hg17|chr3 (132218067-132217686)
               

               
               42-440, gnl|Mm7|chr9 (105120680-105121083)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               42-440, gnl|bosTau2|chr1 (97177450-97177050)
               

               
               42-440, gnl|Hg17|chr3 (132218067-132217686)
               

               
               42-440, gnl|Mm7|chr9 (105120680-105121083)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eye (0.170503)
               

               
               nco (0.161734)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)
               

               
               nco (0.161734)

	42-440, gnl\|bosTau2\|chr1 (97177450-97177050)
	42-440, gnl\|Hg17\|chr3 (132218067-132217686)
	42-440, gnl\|Mm7\|chr9 (105120680-105121083)