Non-Coding RNA Search

Ss1.1-reye1627b_k1.5

Sequence:


               
               CTTCAGCACAAGGCGGGGAGGCGGCCCAGCCAGAAGGGAACCGAGGCCTCACAGCCAGGG
GGCTGTATTCCTACTTCAGAAGTGGCAAGCTATGAGTGTCCCAGCCCTGGCCTCTGGGGG
CCAGCACGGGGAGGAAAGCAGAGTGCAGTTGGCATGTACAGCTAGCATGTCCCCAGACAT
CAGCTCTTCATCGCGGAGCTCCTCTCTTCGGTCTTTCTCAGTGAGACTGTTTCTGTAAGG
TGCTGTGTATCCTAAACTCTTCTCTTACCTGCTTTGCTGTGCAGACCCTCTCCAGAGTCA
TCCGCTTGTGCCAAACTTTCCTTAGTCCATGGGGGTTTTCAGAGCTACTTTAATTTCTGC
CATCTGGCCATTGCCCCATCTATCCTAAGGCATCAATAAAACCTTCCTAAGCAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCAGCACAAGGCGGGGAGGCGGCCCAGCCAGAAGGGAACCGAGGCCTCACAGCCAGGG
GGCTGTATTCCTACTTCAGAAGTGGCAAGCTATGAGTGTCCCAGCCCTGGCCTCTGGGGG
CCAGCACGGGGAGGAAAGCAGAGTGCAGTTGGCATGTACAGCTAGCATGTCCCCAGACAT
CAGCTCTTCATCGCGGAGCTCCTCTCTTCGGTCTTTCTCAGTGAGACTGTTTCTGTAAGG
TGCTGTGTATCCTAAACTCTTCTCTTACCTGCTTTGCTGTGCAGACCCTCTCCAGAGTCA
TCCGCTTGTGCCAAACTTTCCTTAGTCCATGGGGGTTTTCAGAGCTACTTTAATTTCTGC
CATCTGGCCATTGCCCCATCTATCCTAAGGCATCAATAAAACCTTCCTAAGCAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-414, gnl|bosTau2|chr5 (35144294-35144732)
               

               
               1-414, gnl|Hg17|chr1 (149195237-149194796)
               

               
               1-414, gnl|Mm7|chr3 (93255417-93255852)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-414, gnl|bosTau2|chr5 (35144294-35144732)
               

               
               1-414, gnl|Hg17|chr1 (149195237-149194796)
               

               
               1-414, gnl|Mm7|chr3 (93255417-93255852)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ton (0.702001)
               

               
               eye (0.170503)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.702001)
               

               
               eye (0.170503)

	1-414, gnl\|bosTau2\|chr5 (35144294-35144732)
	1-414, gnl\|Hg17\|chr1 (149195237-149194796)
	1-414, gnl\|Mm7\|chr3 (93255417-93255852)