Non-Coding RNA Search

Ss1.1-reye1629b_k1.5

Sequence:


               
               TGTCTTTCGGTTGGTCAGAGGACTTTTTCGTCTAGATGGAAGTTACACCTGCAAATGTTG
CTTAACCCCTGCCCCCCCTCCCCCCACCCCGCAGAGGAAGGGTCTTGGATTTTTGCGAAT
CCAGACCATGCCTGCTTCCTATAAACCCATGTGTATGACATCGTACTGTATCCGCTTTCT
GTGCCAGTCATCTGACCTGATTCTTTGAAACTCATGAAGGTACTGGTTATATGTAGTAGT
TGTATCCTAGATAAATATGGTGATTGAAATACCTCTCCTCTAAATTATAAAGGTAATGGG
TTTTGCATTTTCTTAAAGGGTCCTGTTATTAGTAACACAGGGTTTTTTGTGTTTTTGGTT
TTTTGGTTTTTCAATGCTTCAAAATTACAATACTTACCTAAACTTGTTCAACTAACTTCA
TATAATCAATGACTTAGCAAATTCATACTGGGTCTTATTTTGGCAAGTCTTCCAAAGGAA
GGCTCTATAAAACTGATATAGTCAGTTTCCATCTCTTATAAGTACCAATTGTACAGCCAT
CTAATAATCATAATTTATGGCAAAATTATAACAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTCTTTCGGTTGGTCAGAGGACTTTTTCGTCTAGATGGAAGTTACACCTGCAAATGTTG
CTTAACCCCTGCCCCCCCTCCCCCCACCCCGCAGAGGAAGGGTCTTGGATTTTTGCGAAT
CCAGACCATGCCTGCTTCCTATAAACCCATGTGTATGACATCGTACTGTATCCGCTTTCT
GTGCCAGTCATCTGACCTGATTCTTTGAAACTCATGAAGGTACTGGTTATATGTAGTAGT
TGTATCCTAGATAAATATGGTGATTGAAATACCTCTCCTCTAAATTATAAAGGTAATGGG
TTTTGCATTTTCTTAAAGGGTCCTGTTATTAGTAACACAGGGTTTTTTGTGTTTTTGGTT
TTTTGGTTTTTCAATGCTTCAAAATTACAATACTTACCTAAACTTGTTCAACTAACTTCA
TATAATCAATGACTTAGCAAATTCATACTGGGTCTTATTTTGGCAAGTCTTCCAAAGGAA
GGCTCTATAAAACTGATATAGTCAGTTTCCATCTCTTATAAGTACCAATTGTACAGCCAT
CTAATAATCATAATTTATGGCAAAATTATAACAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               81-569, gnl|bosTau2|chr19 (50535194-50534731)
               

               
               81-569, gnl|Hg17|chr17 (62497834-62497367)
               

               
               81-569, gnl|Mm7|chr11 (107802022-107802504)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               81-569, gnl|bosTau2|chr19 (50535194-50534731)
               

               
               81-569, gnl|Hg17|chr17 (62497834-62497367)
               

               
               81-569, gnl|Mm7|chr11 (107802022-107802504)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eye (0.170503)
               

               
               cje (0.165235)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)
               

               
               cje (0.165235)

	81-569, gnl\|bosTau2\|chr19 (50535194-50534731)
	81-569, gnl\|Hg17\|chr17 (62497834-62497367)
	81-569, gnl\|Mm7\|chr11 (107802022-107802504)