Non-Coding RNA Search

Ss1.1-reye1630b_g14.5

Sequence:


               
               AGACTCGCTTGCACCAGCTCCTTTTGGGGGCTGAGCTGAATGGGGACCTGCGCTTCAGGC
TCAAGAATCTTCTTAGGATGTATGCAAATGAGCAGGAGCGTCTCCCCAATTTCCTGGAGT
TGATCAGAATGATAAGGGAGGAAGAGGATTGGGATGACACTTTCATTAAACGGAAGCGGG
CCAAGAGATCTGAGTCAGTGGTGGAGAGGGCAACTAGCCCAGTGGCATTTCAGGGCTCCC
CACCCATAGTGATTGGCAATGCCGACTGCAACGTGATAGAGATAGAGGATACCCCCGATG
ACGACTCGGATGAGGACGTGATCTTGGTGGAGTCTCAGGACCCCCCACTTTCCTTCTCAG
GTTCTCCTCCCCCCAGGCGCAGAGCCAGACCCCTGGATCCAGTGCTAGTCATTGATTCCC
CCGACAATTCTCAGGCTCAATCGCCTTCCACCAGCAGGGGGTCTGGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGACTCGCTTGCACCAGCTCCTTTTGGGGGCTGAGCTGAATGGGGACCTGCGCTTCAGGC
TCAAGAATCTTCTTAGGATGTATGCAAATGAGCAGGAGCGTCTCCCCAATTTCCTGGAGT
TGATCAGAATGATAAGGGAGGAAGAGGATTGGGATGACACTTTCATTAAACGGAAGCGGG
CCAAGAGATCTGAGTCAGTGGTGGAGAGGGCAACTAGCCCAGTGGCATTTCAGGGCTCCC
CACCCATAGTGATTGGCAATGCCGACTGCAACGTGATAGAGATAGAGGATACCCCCGATG
ACGACTCGGATGAGGACGTGATCTTGGTGGAGTCTCAGGACCCCCCACTTTCCTTCTCAG
GTTCTCCTCCCCCCAGGCGCAGAGCCAGACCCCTGGATCCAGTGCTAGTCATTGATTCCC
CCGACAATTCTCAGGCTCAATCGCCTTCCACCAGCAGGGGGTCTGGGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-468, gnl|bosTau2|chrX (924863-924396)
               

               
               1-468, gnl|Hg17|chrX (117741604-117742068)
               

               
               1-468, gnl|Mm7|chrX (30957709-30958173)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-468, gnl|bosTau2|chrX (924863-924396)
               

               
               1-468, gnl|Hg17|chrX (117741604-117742068)
               

               
               1-468, gnl|Mm7|chrX (30957709-30958173)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eye (0.170503)
               

               
               nje (0.16592)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)
               

               
               nje (0.16592)

	1-468, gnl\|bosTau2\|chrX (924863-924396)
	1-468, gnl\|Hg17\|chrX (117741604-117742068)
	1-468, gnl\|Mm7\|chrX (30957709-30958173)