Non-Coding RNA Search

Ss1.1-reye1631b_f10.5

Sequence:


               
               CTGTTTGACAATAAGCAACATCATGCTTTAATTTTATTTTCTCCTACAGTTATACATCTT
CAGGATGATCCATTTAGCAGACAGCTCTGGACAGACAGAAGGTTTCTCTCAATGTGTAAC
ACATGGCAGTTTTCCACAATGGTGGCATCAAGCCTTTTATAACTTTTTCACCTTTAGCTG
CCTCTTCATTATCCCTCTCCTCATCATGTTGATCTGCAACGCCAAAATCATGTTCACTCT
GACAAGAGTCCTTCAGCAGGATCCCCACAGTATGTATTCCTCAGATTTGGTGTTAATTGC
AGGTAGACAGTGTTTAACAGCAATCCAGCAAGCGTTTAAGCAGAATGGCACTTACTATCA
GCCAAAAACTATCCTAAGCCGTTTGCATAGATTAACTTATTTTAATATTCACAGTCATCC
CATAAGGGGATACTTTTATTATCCCCAATTTATAGATGCAGTCATTTAATGTCTCCTAAC
ATTCTAACTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGTTTGACAATAAGCAACATCATGCTTTAATTTTATTTTCTCCTACAGTTATACATCTT
CAGGATGATCCATTTAGCAGACAGCTCTGGACAGACAGAAGGTTTCTCTCAATGTGTAAC
ACATGGCAGTTTTCCACAATGGTGGCATCAAGCCTTTTATAACTTTTTCACCTTTAGCTG
CCTCTTCATTATCCCTCTCCTCATCATGTTGATCTGCAACGCCAAAATCATGTTCACTCT
GACAAGAGTCCTTCAGCAGGATCCCCACAGTATGTATTCCTCAGATTTGGTGTTAATTGC
AGGTAGACAGTGTTTAACAGCAATCCAGCAAGCGTTTAAGCAGAATGGCACTTACTATCA
GCCAAAAACTATCCTAAGCCGTTTGCATAGATTAACTTATTTTAATATTCACAGTCATCC
CATAAGGGGATACTTTTATTATCCCCAATTTATAGATGCAGTCATTTAATGTCTCCTAAC
ATTCTAACTTTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-372, gnl|bosTau2|chr6 (43606102-43606467)
               

               
               2-372, gnl|Hg17|chr4 (68439313-68438960)
               

               
               2-372, gnl|Mm7|chr5 (86122645-86122327)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-372, gnl|bosTau2|chr6 (43606102-43606467)
               

               
               2-372, gnl|Hg17|chr4 (68439313-68438960)
               

               
               2-372, gnl|Mm7|chr5 (86122645-86122327)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               col (0.195008)
               

               
               eye (0.170503)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               eye (0.170503)
               

               
               eje (0.0988338)

	2-372, gnl\|bosTau2\|chr6 (43606102-43606467)
	2-372, gnl\|Hg17\|chr4 (68439313-68438960)
	2-372, gnl\|Mm7\|chr5 (86122645-86122327)