Ss1.1-reye1632b_g3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTACTGTTTTACAGGTGCTCCTTATTTATTAGAGCTGTGAGAGCTTGGGGATACACCTGG CGAGCGAGCTCGCTTTTTAAAAATGAAATTGGGGGGGCAGGGGAAATGGGGCGGGAGGGA GGGGGAGCTCGCAAGCCCGGGGAGAGATTTATAAAAGTGAATAAAAGGAAAACTTCCAGC AACCAGTTAAACCGACCGACCGACCCCAACACCAAATCCGCCCAGGCAGGGCGCCGCCGC CTCACCTCTGCGTGCCCGTTTCCCTGCGGGGCTCCCACGTTCTCCTCTCTCCCTGCCCGG TGTCCAACTCATCAAAGAAAAATAAATCTCTAAGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTACTGTTTTACAGGTGCTCCTTATTTATTAGAGCTGTGAGAGCTTGGGGATACACCTGG CGAGCGAGCTCGCTTTTTAAAAATGAAATTGGGGGGGCAGGGGAAATGGGGCGGGAGGGA GGGGGAGCTCGCAAGCCCGGGGAGAGATTTATAAAAGTGAATAAAAGGAAAACTTCCAGC AACCAGTTAAACCGACCGACCGACCCCAACACCAAATCCGCCCAGGCAGGGCGCCGCCGC CTCACCTCTGCGTGCCCGTTTCCCTGCGGGGCTCCCACGTTCTCCTCTCTCCCTGCCCGG TGTCCAACTCATCAAAGAAAAATAAATCTCTAAGAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 78-192, + strand, RNAz p=0.976882 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 78-192, + strand, RNAz p=0.976882 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 1-336, gnl|bosTau2|chr9 (24142240-24142580) | |
| 1-336, gnl|Hg17|chr6 (108087687-108088027) | |
| 1-336, gnl|Mm7|chr10 (42813177-42812847) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-336, gnl|bosTau2|chr9 (24142240-24142580) | |
| 1-336, gnl|Hg17|chr6 (108087687-108088027) | |
| 1-336, gnl|Mm7|chr10 (42813177-42812847) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) | |
| eye (0.170503) |