Non-Coding RNA Search

Ss1.1-reye1632b_l17.5

Sequence:


               
               TGGCTGGTAGTAGATGAATCAGATAAACTGTTTGAAGATGGCAAAACTGGGTTCAGAGAT
CAACTAGCTTCCATTTTCTTGGCCTGCACATCCCACAAAGTCAAAAGAGCTATGTTCAGT
GCAACTTTTGCCTATGATGTTGAGCAGTGGTGCAAACTCAACCTGGACAATGTCATTACT
GTATCCATTGGAGCAAGGAATTCTGCAGTAGAGACTGTAGAACAAGAGCTGCTCTTTGTT
GGATCTGAGACTGGAAAACTTCTGGCCATGAGAGAACTTGTTAAAAAGGGTTTCAATCCA
CCTGTCCTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGCTGGTAGTAGATGAATCAGATAAACTGTTTGAAGATGGCAAAACTGGGTTCAGAGAT
CAACTAGCTTCCATTTTCTTGGCCTGCACATCCCACAAAGTCAAAAGAGCTATGTTCAGT
GCAACTTTTGCCTATGATGTTGAGCAGTGGTGCAAACTCAACCTGGACAATGTCATTACT
GTATCCATTGGAGCAAGGAATTCTGCAGTAGAGACTGTAGAACAAGAGCTGCTCTTTGTT
GGATCTGAGACTGGAAAACTTCTGGCCATGAGAGAACTTGTTAAAAAGGGTTTCAATCCA
CCTGTCCTTGTTTTTGTTCAGTCCATTGAAAGGGCTAAAGAACTTTTTCATGAGCTCATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-204, gnl|bosTau2|chr19 (6947879-6948083)
               

               
               1-204, gnl|Hg17|chr17 (33060250-33060039)
               

               
               1-204, gnl|Mm7|chr11 (84022027-84022238)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-204, gnl|bosTau2|chr19 (6947879-6948083)
               

               
               1-204, gnl|Hg17|chr17 (33060250-33060039)
               

               
               1-204, gnl|Mm7|chr11 (84022027-84022238)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               eye (0.170503)
               

               
               liv (0.146284)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)
               

               
               liv (0.146284)

	1-204, gnl\|bosTau2\|chr19 (6947879-6948083)
	1-204, gnl\|Hg17\|chr17 (33060250-33060039)
	1-204, gnl\|Mm7\|chr11 (84022027-84022238)