Non-Coding RNA Search

Ss1.1-reye1633b_a3.5

Sequence:


               
               GAAATAAAGTTCTCCCCCTCCTCTCTGTACATAGTGGCCTTGGCAGTTACATAGATTCAA
TAAAAATGAGCCTTGGGAAAAAAAAAAAAAAAAAAAACCTCGTGCCGAATTCGGCACGAG
GCTTTGATCTGAATTGTACAGGTATGCCTATTTCCCCCCACTTTCTATCTTTCGGGAAAA
ATGAAGGAAATTAGTCTTACTAAAACGGATACCGAGAATGCAAATTTGTCTCATTACATC
CTAGTCAAGATGTGACCTTTATTTTCAAAGAAATTCTTTGACTTTCTGAGTCGGCTAATT
GCTATGAGAACATACTACATAAAATAAAAGCAGGGAAATTAAAACTTAAACGCAAGGGAA
ATTTTTAAGTGCATTTCAAATACTTGAAGTTGTGAAGCTTTGAATGGGAGGTTAAGAGTT
AACTACTGTTGCCAGAGAAACTGTTTCTACAGAGGAATCGACAACCTGCATTTTTTTTTT
AAACAGTACAAAATAAAACTCTTCCAGTTTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAATAAAGTTCTCCCCCTCCTCTCTGTACATAGTGGCCTTGGCAGTTACATAGATTCAA
TAAAAATGAGCCTTGGGAAAAAAAAAAAAAAAAAAAACCTCGTGCCGAATTCGGCACGAG
GCTTTGATCTGAATTGTACAGGTATGCCTATTTCCCCCCACTTTCTATCTTTCGGGAAAA
ATGAAGGAAATTAGTCTTACTAAAACGGATACCGAGAATGCAAATTTGTCTCATTACATC
CTAGTCAAGATGTGACCTTTATTTTCAAAGAAATTCTTTGACTTTCTGAGTCGGCTAATT
GCTATGAGAACATACTACATAAAATAAAAGCAGGGAAATTAAAACTTAAACGCAAGGGAA
ATTTTTAAGTGCATTTCAAATACTTGAAGTTGTGAAGCTTTGAATGGGAGGTTAAGAGTT
AACTACTGTTGCCAGAGAAACTGTTTCTACAGAGGAATCGACAACCTGCATTTTTTTTTT
AAACAGTACAAAATAAAACTCTTCCAGTTTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               121-515, gnl|bosTau2|chr12 (20721646-20721273)
               

               
               121-515, gnl|Hg17|chr13 (19613339-19612943)
               

               
               121-515, gnl|Mm7|chr14 (51902633-51902246)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               121-515, gnl|bosTau2|chr12 (20721646-20721273)
               

               
               121-515, gnl|Hg17|chr13 (19613339-19612943)
               

               
               121-515, gnl|Mm7|chr14 (51902633-51902246)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eye (0.341006)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.341006)

	121-515, gnl\|bosTau2\|chr12 (20721646-20721273)
	121-515, gnl\|Hg17\|chr13 (19613339-19612943)
	121-515, gnl\|Mm7\|chr14 (51902633-51902246)