Non-Coding RNA Search

Ss1.1-rfat0102_d6.5

Sequence:


               
               AGTTTTGAATTCTGTGAAGCTCATATACCTTTTTATAATAGGTAGGAATAAAATAACACG
GTGCCATGATTTCTGCATTACTTAGTATATTCCTATGCCCTATAATAAATTGCCCTGGTT
TTTACTTTAAGATCTAAAAATTTTGTGTTATTCACATGTATGCTAATTTGGAACCAAAAC
ATAGTCTTAAAAAATAATCGCTTTATTTTAAAATTCTTCATTTTTCTGGTTAAACTTGCT
AGTAAATTATAAACTTCAGCCATGGTAGCCTCCTCGGGGATTATTTTACTTCTGGCTTTA
TTTCTAGCAATTTCTCTGTGCTGTACATACAAGTCAAGGCCAACTATCAACTATTTGGTG
AATTAAGCCAATTATATCATAAGATTATTTCCTTATCAGTTCTACTTCTAAATTTGTTCT
TCAGCATAGTTGTTTTCAAAGAATACCTAAATATATAGTAAAATCATAGTTTTAATGTTT
CGTCAACCCGTGTACCTATATTAATACGTTCTATATGATTTTGTAGTTATCTTAAGAATT
AGTAATGAAATGTATACCATTACCAGAAATGTTTATTGTGTTTCTGTGTTTTGTTGAGAT
AAAATAACATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTTTTGAATTCTGTGAAGCTCATATACCTTTTTATAATAGGTAGGAATAAAATAACACG
GTGCCATGATTTCTGCATTACTTAGTATATTCCTATGCCCTATAATAAATTGCCCTGGTT
TTTACTTTAAGATCTAAAAATTTTGTGTTATTCACATGTATGCTAATTTGGAACCAAAAC
ATAGTCTTAAAAAATAATCGCTTTATTTTAAAATTCTTCATTTTTCTGGTTAAACTTGCT
AGTAAATTATAAACTTCAGCCATGGTAGCCTCCTCGGGGATTATTTTACTTCTGGCTTTA
TTTCTAGCAATTTCTCTGTGCTGTACATACAAGTCAAGGCCAACTATCAACTATTTGGTG
AATTAAGCCAATTATATCATAAGATTATTTCCTTATCAGTTCTACTTCTAAATTTGTTCT
TCAGCATAGTTGTTTTCAAAGAATACCTAAATATATAGTAAAATCATAGTTTTAATGTTT
CGTCAACCCGTGTACCTATATTAATACGTTCTATATGATTTTGTAGTTATCTTAAGAATT
AGTAATGAAATGTATACCATTACCAGAAATGTTTATTGTGTTTCTGTGTTTTGTTGAGAT
AAAATAACATTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-606, gnl|bosTau2|chr10 (46446040-46445434)
               

               
               1-606, gnl|Hg17|chr14 (56818659-56819257)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-606, gnl|bosTau2|chr10 (46446040-46445434)
               

               
               1-606, gnl|Hg17|chr14 (56818659-56819257)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fat (0.147427)
               

               
               ret (0.128733)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)
               

               
               ret (0.128733)

	1-606, gnl\|bosTau2\|chr10 (46446040-46445434)
	1-606, gnl\|Hg17\|chr14 (56818659-56819257)