Non-Coding RNA Search

Ss1.1-rfat0103_h8.5

Sequence:


               
               GCAGCGGCTGCTGCTCGGGAGTGCGCGCCAGGCAATCCTCGGGTCCGCGGAGGTTGCGTT
CTGGGGTTTGAAGTCAATAAAAGGAAGCTACCACAATTTTTGTACTGCTGAGTGTAAAGA
TGTCACTTATACGGAACTTAAAAGCCTCTTGAAATCCAAAAAAATTATGTTAATTGATGT
TAGAGAAACCTGGGAAATTCTTGAGTATGGAAAAATCCCTGGGTCTGTCAATATACCATT
GGATGATGTAGGTAAAGCTCTGCAGATGAGCCCAAAAGACTTCAAAGAGAAGTACAATGA
AGTAAAACCATCCCAATCCGACAGTCTAGTGTTTTCTTGTTTAGCTGGAGTGAGAAGCAA
GAAGGCTCTGAACACAGCAGTATCTCTGGGCTTTAACAGTGCACAACACTATGCTGGAGG
ATGGAAGGAATGGGCAACATATGAATTTTCAGAGAAGAAACAAGGAAATTGAATTTTGGA
ATACAACTGGCCCTTTCCTTGTGTACATGCAACCCAGGACAGTGGAATAAGCAAAAGAAT
AAAAATGTAGCCCTGGCACCATTGGTTAATGGCAAGGGGATTTGTATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGCGGCTGCTGCTCGGGAGTGCGCGCCAGGCAATCCTCGGGTCCGCGGAGGTTGCGTT
CTGGGGTTTGAAGTCAATAAAAGGAAGCTACCACAATTTTTGTACTGCTGAGTGTAAAGA
TGTCACTTATACGGAACTTAAAAGCCTCTTGAAATCCAAAAAAATTATGTTAATTGATGT
TAGAGAAACCTGGGAAATTCTTGAGTATGGAAAAATCCCTGGGTCTGTCAATATACCATT
GGATGATGTAGGTAAAGCTCTGCAGATGAGCCCAAAAGACTTCAAAGAGAAGTACAATGA
AGTAAAACCATCCCAATCCGACAGTCTAGTGTTTTCTTGTTTAGCTGGAGTGAGAAGCAA
GAAGGCTCTGAACACAGCAGTATCTCTGGGCTTTAACAGTGCACAACACTATGCTGGAGG
ATGGAAGGAATGGGCAACATATGAATTTTCAGAGAAGAAACAAGGAAATTGAATTTTGGA
ATACAACTGGCCCTTTCCTTGTGTACATGCAACCCAGGACAGTGGAATAAGCAAAAGAAT
AAAAATGTAGCCCTGGCACCATTGGTTAATGGCAAGGGGATTTGTATA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61849664|ref|XP_589240.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61849664|ref|XP_589240.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-561, gnl|bosTau2|chr4 (41235889-41235328)
               

               
               1-561, gnl|Hg17|chr5 (54209704-54210267)
               

               
               1-561, gnl|Mm7|chr4 (21763457-21761982)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-561, gnl|bosTau2|chr4 (41235889-41235328)
               

               
               1-561, gnl|Hg17|chr5 (54209704-54210267)
               

               
               1-561, gnl|Mm7|chr4 (21763457-21761982)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

Help | Less info


               
               fat (0.147427)
               

               
               cst (0.140036)
               

               
               nbm (0.0993246)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)
               

               
               cst (0.140036)
               

               
               nbm (0.0993246)

	1-561, gnl\|bosTau2\|chr4 (41235889-41235328)
	1-561, gnl\|Hg17\|chr5 (54209704-54210267)
	1-561, gnl\|Mm7\|chr4 (21763457-21761982)