Ss1.1-rfat0103_p15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGAGTACAGTAAAGTCTTACAGTTCAAGTATTTTATGGTTCTCATTNCAGGAAATGGCCT TAAAAGTTGATCAGGGGTTTCTAGGAGCTATTACTGCACTGTTTACTCCAACAGCTGATC CTGAAGCTGAAAGAAAACGGACAGAGTTAATCCAGAAAGAATCTGATGCTCTAAACACAG AATTAGTGGAGACTTCAGTGACTGATACATCCATTCTTAGTTTCTTTGAGCACTTCCATA TTTCTCCTATTAAGTTGCATTTGAGTTTATCTTTGGGTTCTGGTGGTGAAGAATCAGACA AAGAAGAACAGGAAATGATTCCAATTCATTCCATCAACCTGCTATTGAAAAGCATAGGTG CTACTCTGACTGATGTGGATGACCTTATATTCAAATTGGCTTATTATGAAATTCGATATC AGTTTTACAACAGAGATCAACTCATGTGGAGTGTTGTTAGACATTACAGTGAACAGTTCT TGAAGCAGATGTATGTCCTTGTATTGGGCTTAGATGTGCTTGGAAACCCATTTGGATTGA TTAGAGGCTTGTCTGAAGGATTCGAAGCTTTATTCTATGAACCCTTCCAGGGTGCTGTTC AAGGCCCTGAAGAATTTGCTGAGGGGTTAGTAATTGGAGTAAGAAGTCTCTTTGGACACA CAGTAGGTGGAGCAGCAGGGGTTGTATCTCGAATCACTGGTTCTGTTGGAAAAGGTTTGG CAGCAATTACAATGGACAAAGAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGAGTACAGTAAAGTCTTACAGTTCAAGTATTTTATGGTTCTCATTNCAGGAAATGGCCT TAAAAGTTGATCAGGGGTTTCTAGGAGCTATTACTGCACTGTTTACTCCAACAGCTGATC CTGAAGCTGAAAGAAAACGGACAGAGTTAATCCAGAAAGAATCTGATGCTCTAAACACAG AATTAGTGGAGACTTCAGTGACTGATACATCCATTCTTAGTTTCTTTGAGCACTTCCATA TTTCTCCTATTAAGTTGCATTTGAGTTTATCTTTGGGTTCTGGTGGTGAAGAATCAGACA AAGAAGAACAGGAAATGATTCCAATTCATTCCATCAACCTGCTATTGAAAAGCATAGGTG CTACTCTGACTGATGTGGATGACCTTATATTCAAATTGGCTTATTATGAAATTCGATATC AGTTTTACAACAGAGATCAACTCATGTGGAGTGTTGTTAGACATTACAGTGAACAGTTCT TGAAGCAGATGTATGTCCTTGTATTGGGCTTAGATGTGCTTGGAAACCCATTTGGATTGA TTAGAGGCTTGTCTGAAGGATTCGAAGCTTTATTCTATGAACCCTTCCAGGGTGCTGTTC AAGGCCCTGAAGAATTTGCTGAGGGGTTAGTAATTGGAGTAAGAAGTCTCTTTGGACACA CAGTAGGTGGAGCAGCAGGGGTTGTATCTCGAATCACTGGTTCTGTTGGAAAAGGTTTGG CAGCAATTACAATGGACAAAGAAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 28-140, gnl|bosTau2|chr10 (32463600-32463489) | |
| 28-140, gnl|canFam2|chr30 (29619962-29620094) | |
| 28-140, gnl|danRer3|chr13 (37803968-37804099) | |
| 28-140, gnl|dasNov1|scaffold_41972 (6055-5922) | |
| 28-140, gnl|fr1|chrUn (201594195-201594323) | |
| 28-140, gnl|galGal2|chr10 (5299385-5299245) | |
| 28-140, gnl|hg17|chr15 (59960331-59960463) | |
| 28-140, gnl|Hg17|chr15 (59960445-59960334) | |
| 28-140, gnl|loxAfr1|scaffold_6347 (17182-17044) | |
| 28-140, gnl|mm7|chr9 (67996433-67996316) | |
| 28-140, gnl|Mm7|chr9 (67996317-67996428) | |
| 28-140, gnl|monDom2|scaffold_12 (52309809-52309677) | |
| 28-140, gnl|oryCun1|scaffold_174591 (30110-29981) | |
| 28-140, gnl|panTro1|chr16 (60406948-60407080) | |
| 28-140, gnl|rheMac2|chr7 (40291891-40292024) | |
| 28-140, gnl|rn3|chr8 (72362113-72361996) | |
| 28-140, gnl|tetNig1|chrUn_random (6230454-6230576) | |
| 28-140, gnl|xenTro1|scaffold_62 (776919-777048) | |
| 239-433, gnl|bosTau2|chr10 (32461614-32461420) | |
| 239-433, gnl|Hg17|chr15 (59958251-59958056) | |
| 239-433, gnl|Mm7|chr9 (67997878-67998076) | |
| 475-591, gnl|bosTau2|chr10 (32458620-32458504) | |
| 475-591, gnl|canFam2|chr30 (29614925-29615000) | |
| 475-591, gnl|danRer3|chr13 (37800657-37800732) | |
| 475-591, gnl|echTel1|scaffold_285599 (37831-37756) | |
| 475-591, gnl|fr1|chrUn (201592417-201592492) | |
| 475-591, gnl|galGal2|chr10 (5301458-5301383) | |
| 475-591, gnl|hg17|chr15 (59955221-59955296) | |
| 475-591, gnl|Hg17|chr15 (59955338-59955222) | |
| 475-591, gnl|loxAfr1|scaffold_2519 (68851-68776) | |
| 475-591, gnl|mm7|chr9 (68002957-68002882) | |
| 475-591, gnl|Mm7|chr9 (68002838-68002954) | |
| 475-591, gnl|monDom2|scaffold_12 (52316417-52316342) | |
| 475-591, gnl|oryCun1|scaffold_174591 (35382-35307) | |
| 475-591, gnl|panTro1|chr16 (60401848-60401923) | |
| 475-591, gnl|rheMac2|chr7 (40286776-40286851) | |
| 475-591, gnl|rn3|chr8 (72367703-72367628) | |
| 475-591, gnl|tetNig1|chrUn_random (6229471-6229546) | |
| 475-591, gnl|xenTro1|scaffold_62 (774235-774310) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 28-140, gnl|bosTau2|chr10 (32463600-32463489) | |
| 28-140, gnl|canFam2|chr30 (29619962-29620094) | |
| 28-140, gnl|danRer3|chr13 (37803968-37804099) | |
| 28-140, gnl|dasNov1|scaffold_41972 (6055-5922) | |
| 28-140, gnl|fr1|chrUn (201594195-201594323) | |
| 28-140, gnl|galGal2|chr10 (5299385-5299245) | |
| 28-140, gnl|hg17|chr15 (59960331-59960463) | |
| 28-140, gnl|Hg17|chr15 (59960445-59960334) | |
| 28-140, gnl|loxAfr1|scaffold_6347 (17182-17044) | |
| 28-140, gnl|mm7|chr9 (67996433-67996316) | |
| 28-140, gnl|Mm7|chr9 (67996317-67996428) | |
| 28-140, gnl|monDom2|scaffold_12 (52309809-52309677) | |
| 28-140, gnl|oryCun1|scaffold_174591 (30110-29981) | |
| 28-140, gnl|panTro1|chr16 (60406948-60407080) | |
| 28-140, gnl|rheMac2|chr7 (40291891-40292024) | |
| 28-140, gnl|rn3|chr8 (72362113-72361996) | |
| 28-140, gnl|tetNig1|chrUn_random (6230454-6230576) | |
| 28-140, gnl|xenTro1|scaffold_62 (776919-777048) | |
| 239-433, gnl|bosTau2|chr10 (32461614-32461420) | |
| 239-433, gnl|Hg17|chr15 (59958251-59958056) | |
| 239-433, gnl|Mm7|chr9 (67997878-67998076) | |
| 475-591, gnl|bosTau2|chr10 (32458620-32458504) | |
| 475-591, gnl|canFam2|chr30 (29614925-29615000) | |
| 475-591, gnl|danRer3|chr13 (37800657-37800732) | |
| 475-591, gnl|echTel1|scaffold_285599 (37831-37756) | |
| 475-591, gnl|fr1|chrUn (201592417-201592492) | |
| 475-591, gnl|galGal2|chr10 (5301458-5301383) | |
| 475-591, gnl|hg17|chr15 (59955221-59955296) | |
| 475-591, gnl|Hg17|chr15 (59955338-59955222) | |
| 475-591, gnl|loxAfr1|scaffold_2519 (68851-68776) | |
| 475-591, gnl|mm7|chr9 (68002957-68002882) | |
| 475-591, gnl|Mm7|chr9 (68002838-68002954) | |
| 475-591, gnl|monDom2|scaffold_12 (52316417-52316342) | |
| 475-591, gnl|oryCun1|scaffold_174591 (35382-35307) | |
| 475-591, gnl|panTro1|chr16 (60401848-60401923) | |
| 475-591, gnl|rheMac2|chr7 (40286776-40286851) | |
| 475-591, gnl|rn3|chr8 (72367703-72367628) | |
| 475-591, gnl|tetNig1|chrUn_random (6229471-6229546) | |
| 475-591, gnl|xenTro1|scaffold_62 (774235-774310) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fat (0.147427) |