Non-Coding RNA Search

Ss1.1-rfat0105_f21.5

Sequence:


               
               GAATTGCCAGCTATGAACCTCACTTGGATCCACACCACTCCAATTTGCAATCCCCCTCTC
AGTTCCCCAGGTGCCATCTCCTTTACCATGGTCCTTTAGGCACTGGAACCAGCATCGGTG
TCATCCTGTTCCTCCAGCATGGAGTACAGCCCTTCGCCCATTCAGCCCTAGCCACTCCAG
TTCCATCTACTACAGCATCTCCTGTCACCCCTGGCGATCCTAAGAAACTATCTGGAGAGG
GGCCTTGTTGCCACAGTTTGCCAGTAACTCTGCCATCAGACTGGAACTGTAACCCATCCC
CTCCTGGTCTACCCGTTGTGACCAGAGAGATGACCATAGGACACCTAGAGCAGATGAGAA
GCCATCCTCCAGTTGCTCCTGATGTCCATCCTCTTAACCCCTAATCCAGGACTTGAGACT
GAGAACTGTAGTTTCTAATTTGTGTAAATATATGTCTCTCTCTCTATTTTTTTACTTTTA
ATGTGTGCATTTGTGTTGAGGGAAGATAAATCCTTTCTGATTAAATAAATTTTATATCTT
AGAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATTGCCAGCTATGAACCTCACTTGGATCCACACCACTCCAATTTGCAATCCCCCTCTC
AGTTCCCCAGGTGCCATCTCCTTTACCATGGTCCTTTAGGCACTGGAACCAGCATCGGTG
TCATCCTGTTCCTCCAGCATGGAGTACAGCCCTTCGCCCATTCAGCCCTAGCCACTCCAG
TTCCATCTACTACAGCATCTCCTGTCACCCCTGGCGATCCTAAGAAACTATCTGGAGAGG
GGCCTTGTTGCCACAGTTTGCCAGTAACTCTGCCATCAGACTGGAACTGTAACCCATCCC
CTCCTGGTCTACCCGTTGTGACCAGAGAGATGACCATAGGACACCTAGAGCAGATGAGAA
GCCATCCTCCAGTTGCTCCTGATGTCCATCCTCTTAACCCCTAATCCAGGACTTGAGACT
GAGAACTGTAGTTTCTAATTTGTGTAAATATATGTCTCTCTCTCTATTTTTTTACTTTTA
ATGTGTGCATTTGTGTTGAGGGAAGATAAATCCTTTCTGATTAAATAAATTTTATATCTT
AGAAAAAAAAAA

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               1-241, gnl|bosTau2|chr3 (17173430-17173189)
               

               
               1-241, gnl|Hg17|chr1 (147072035-147072276)
               

               
               1-241, gnl|Mm7|chr3 (95752979-95752742)
               


               
               354-539, gnl|bosTau2|chr3 (17173210-17173027)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-241, gnl|bosTau2|chr3 (17173430-17173189)
               

               
               1-241, gnl|Hg17|chr1 (147072035-147072276)
               

               
               1-241, gnl|Mm7|chr3 (95752979-95752742)
               


               
               354-539, gnl|bosTau2|chr3 (17173210-17173027)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fat (0.147427)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)

	1-241, gnl\|bosTau2\|chr3 (17173430-17173189)
	1-241, gnl\|Hg17\|chr1 (147072035-147072276)
	1-241, gnl\|Mm7\|chr3 (95752979-95752742)

	354-539, gnl\|bosTau2\|chr3 (17173210-17173027)