Ss1.1-rfat0107_a21.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAGAGGCTTTGATGGACGAAATGGAGAAAAAGGTGATACAGGTGCTCCTGGGCTGAAGGG TGAAAATGGCCTTCCAGGTGAAAATGGAGCTCCTGGACCCATGGGTCCAAGAGGGGCTCC TGGTGAGCGAGGACGGCCAGGACTTCCTGGAGCTGCAGGGGCTCGAGGTAATGATGGTGC CCGAGGAAGTGATGGACAACCAGGTCCCCCTGGTCCCCCTGGAACTGCAGGATTCCCTGG TTCCCCTGGTGCTAAGGGTGAAGTTGGACCCGCGGGATCTCCTGGTCCAAGTGGATCCCC TGGACAAAGAGGAGAACCTGGACCTCAGGGACATGCCGGTGCTGCAGGTCCTCCTGGCCC TCCTGGGAGTAATGGTAGTCCTGGTGGCAAAGGTGAAATGGGTCCTGCTGGCATCCCTGG AGCTCCTGGATTGATGGGAGCCCGTGGTCCTCCAGGACCACCTGGTACCAATGGTGCTCC TGGGCAACGAGGTGCAGCAGGTGAACCTGGTAAAAATGGGGCCAAAGGAGAGCCAGGACC ACGTGGTGAACGTGGGGAAGCTGGTTCTCCGGGTATTCCAGGACCCAAGGGTGAAGATGG CAAAGATGGTTCTCCTGGAGAACCTGGTGCAAATGGACTTCCAGGAGCTGCAGGAGAAAG GGGTATGCCTGGATTCCGAGGAGCTCCTGGAGCAAATGGCCTTCCAGGAGAAAAGGGTCC CGCTGGCGAGCGCGGTGGTCCAGGCCCCGCAGGGCCCAGAGGAGTTGCCGGAGAACCTGG CCGAGATGGTGTTCCTGGAGGTCCAGGATTGAGGGGCATGCCCGGTAGCCCCGGAGGACC AGGCAGTGATGGGAAACCAGGACCTCCTGGAAGTCAGGGAGAAAGTGGTCGACCAGGTCC TCCAGGCTCACCTGGTCCCCGAGGTCAGCCTGGAGTCATGGGCTTCCCTGGTCCTAAAGG AAATGACGGTGCTCCTGGAAAGAATGGAGAAAGAGGTGGCCCTGGAGGTCCCGGCCTTCC GGGTCCTCCTGGAAAGAATGGTGAGACAGGACCTCAGGGTCCCCCAGGACCTACTGGGCC AGGTGGTGACAAAGGAGACACAGGACCCCCTGGTCAACAAGGATTACAAGGCTTGCCTGG AACCAGTGGTCCTCCAGGAGAAAATGGAAAACCTGGTGAACCCGGCCCAAAAGGTGAAGC TGGTGCACCTGGAATTCCAGGAGGCAAGGGTGATTCTGGTGCCCCCGGTGAACGTGGACC TCCTGGTGCAGTAGGTCCCTCAGGACCTAGAGGTGGAGCTGGCCCCCCTGGTCCCGAAGG AGGAAAGGGCCCTGCTGGTCCCCCTGGGCCGCCTGGTGCCGCTGGTACACCTGGTCTGCA AGGGATGCCTGGAGAAAGAGGAGGTTCTGGAGGCCCCGGCCCAAAGGGTGACAAGGGTGA CCCTGGCGGTTCAGGTGCTGATGGTGCTCCAGGAAAAGATGGTCCAAGGGGTCCTACTGG TCCCATTGGTCCCCCTGGTCCAGCTGGTCAGCCTGGAGATAAGGGTGAAAGTGGTGCCCC TGGACTTCCTGGTATAGCTGGTCCTCGTGGTGGCCCTGGTGAGAGAGGTGAACATGGGCC ACCAGGACCTGCCGGCTTCCCTGGTGCTCCTGGCCAGAACGGTGAGCCTGGTGCCAAAGG AGAAAGAGGCGCTCCTGGTGAGAAAGGTGAAGGAGGACCTCCTGGGATTGCAGGACAGCC CGGAGGCACTGGGCCTCCTGGTCCCCCTGGTCCCCAAGGTGTCAAAGGTGAACGTGGCAG TCCTGGTGGTCCTGGTGCTGCTGGGTTCCCCGGTGGTCGTGGTCTTCCTGGTCCTCCTGG CAGTAACGGTAACCCAGGCCCCCCTGGCTCCAGTGGTCCTCCAGGCAAAGATGGTCCCCC AGGTCCACCTGGTAGCAGTGGTGCTCCTGGCAGCCCTGGAGTATCTGGACCGAAAGGTGA TGCCGGTCAACCAGGTGAAAAAGGATCACCTGGCCCCCAGGGCCCTCCGGGAGCTCCAGG CCCAGGTGGAATTTCAGGGATTACTGGAGCACGAGGTCTCGCAGGCCCACCAGGCATGCC AGGTGCTAGGGGAAGCCCTGGCCCACAGGGCGTCAAGGGTGAAAATGGAAAACCAGGACC TAGTGGTCTCAATGGAGAACGTGGTCCTCCTGGACCCCAGGGTCTTCCTGGTCTGGCTGG TGCAGCTGGTGAACCTGGACGAGATGGAAACCCTGGATCAGATGGTCTGCCAGGCCGAGA CGGAGCTCCCGGTAGCAAGGGCGATCGTGGTGAAAATGGCTCTCCTGGTGCCCCTGGTGC TCCTGGTCACCCAGGCCCACCTGGCCCTGTTGGTCCTGCTGGAAAGAATGGTGACAGAGG AGAAACTGGCCCTGCTGGTCCTGCTGGTGCTCCAGGTCCTGCTGGTTCAAGAGGTGCTCC TGGTCCCCAAGGCCCACGCGGTGACAAAGGTGAAACCGGTGAACGTGGTGCTAATGGCAT CAAAGGACATCGAGGATTCCCTGGTAATCCAGGTGCCCCAGGTTCTCCAGGTCCCGCTGG TCACCAAGGTGCAGTAGGTAGCCCAGGACCTGCAGGCCCCAGAGGACCTGTTGGACCGAG TGGGCCCCCTGGCAAAGATGGAGCAAGTGGACACCCTGGTCCCATTGGACCACCAGGGCC TCGAGGTAACAGAGGTGAAAGAGGATCTGAGGGCTCCCCAGGCCATCCAGGACAACCAGG CCCTCCTGGACCCCCTGGTGCCCCTGGTCCATGTTGTGGTGGTGGGGCTGCTGCCATCGC TGGTGTTGGAGGTGAAAAAGCTGGTGGTTTTGCCCCATATTATGGAGATGAACCAATGGA TTTCAAAATCAACACCGACGAGATTATGACTTCACTTAAATCCGTCAACGGACAAATAGA AAGCCTCATTAGTCCCGATGGTTCTCGTAAAAACCCTGCTCGTAACTGCAGAGACCTAAA ATTCTGCCATCCTGAGCTCAAGAGCGGAGAATATTGGGTTGATCCTAACCAAGGCTGCAA AATGGATGCTATTAAAGTATTTTGTAACATGGAAACTGGGGAAACATGCATAAGTGCCAG TCCTTCTACTGTTCCACGTAAGAACTGGTGGACAGATTCTGGTGCTGAGAAGAAATATGT TTGGTTTGGAGAATCCATGAATGGTGGTTTTCAGTTTAGCTATGGCAATCCTGAACTTCC TGAAGATGTCCTTGATGTCCAGTTGGCATTCCTTCGACTTCTCTCTAGCCGAGCTTCCCA GAACATCACATATCACTGCAAGAATAGCATTGCGTACATGGAACATGCCAGTGGGAATGT AAAGAAAGCCTTGAGGCTGATGGGATCAAATGAAGGTGAATTCAAGGCTGAAGGAAATAG CAAATTCACATACACCGTTCTGGAGGATGGTTGCACTAAACACACTGGGGAATGGGGCAA GACAGTCTTCGAATATCGAACACGCAAGGCTGTGAGACTACCTATTGTAGATATTGCACC CTATGATATTGGTGGTCCTGATCAAGAATTTGGTGCGGACATTGGCCCTGTTTGCTTTTT ATAAACCAAACTCTATCTGAATTCCCAGCAAAAGATTTCACACTCCATATGTGTTCCTTT TGTTCTCATCTTGTCAACCAGTACAAGTGACCAACTAAATTCCAGTTATTTATTTCCAAA ATTTTTGGAAAAAGGATAATTTGACCTAAAAAGGATACTTTTTTCTGTCACACCAAATAC AGTTCGAATGCTTTTTGTTCTATTTTTTTACCAGTTCCAATTTCAAATGTCTCAATGGTG CTATAATAAATAAACTTCAACACTCTTCCAATTACACTGCGTTACATTCTTTGAATCCTA GCCCATTTGCAAAGCAATGACTATGTTTATCGTTAAAAGATAACCATTCTTTCTGAAATA GTCAAACACGCAATTCAAAAAGACCTCCCTGTTTCAACTACCTCAACCTGGTCAGAAACA CAAAAGTCCCAGAAGATGAAAAACATTTCTATAAAATGCCAAAACTTATACATTTCCCTG ATTAATTTTCTAAAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAGAGGCTTTGATGGACGAAATGGAGAAAAAGGTGATACAGGTGCTCCTGGGCTGAAGGG TGAAAATGGCCTTCCAGGTGAAAATGGAGCTCCTGGACCCATGGGTCCAAGAGGGGCTCC TGGTGAGCGAGGACGGCCAGGACTTCCTGGAGCTGCAGGGGCTCGAGGTAATGATGGTGC CCGAGGAAGTGATGGACAACCAGGTCCCCCTGGTCCCCCTGGAACTGCAGGATTCCCTGG TTCCCCTGGTGCTAAGGGTGAAGTTGGACCCGCGGGATCTCCTGGTCCAAGTGGATCCCC TGGACAAAGAGGAGAACCTGGACCTCAGGGACATGCCGGTGCTGCAGGTCCTCCTGGCCC TCCTGGGAGTAATGGTAGTCCTGGTGGCAAAGGTGAAATGGGTCCTGCTGGCATCCCTGG AGCTCCTGGATTGATGGGAGCCCGTGGTCCTCCAGGACCACCTGGTACCAATGGTGCTCC TGGGCAACGAGGTGCAGCAGGTGAACCTGGTAAAAATGGGGCCAAAGGAGAGCCAGGACC ACGTGGTGAACGTGGGGAAGCTGGTTCTCCGGGTATTCCAGGACCCAAGGGTGAAGATGG CAAAGATGGTTCTCCTGGAGAACCTGGTGCAAATGGACTTCCAGGAGCTGCAGGAGAAAG GGGTATGCCTGGATTCCGAGGAGCTCCTGGAGCAAATGGCCTTCCAGGAGAAAAGGGTCC CGCTGGCGAGCGCGGTGGTCCAGGCCCCGCAGGGCCCAGAGGAGTTGCCGGAGAACCTGG CCGAGATGGTGTTCCTGGAGGTCCAGGATTGAGGGGCATGCCCGGTAGCCCCGGAGGACC AGGCAGTGATGGGAAACCAGGACCTCCTGGAAGTCAGGGAGAAAGTGGTCGACCAGGTCC TCCAGGCTCACCTGGTCCCCGAGGTCAGCCTGGAGTCATGGGCTTCCCTGGTCCTAAAGG AAATGACGGTGCTCCTGGAAAGAATGGAGAAAGAGGTGGCCCTGGAGGTCCCGGCCTTCC GGGTCCTCCTGGAAAGAATGGTGAGACAGGACCTCAGGGTCCCCCAGGACCTACTGGGCC AGGTGGTGACAAAGGAGACACAGGACCCCCTGGTCAACAAGGATTACAAGGCTTGCCTGG AACCAGTGGTCCTCCAGGAGAAAATGGAAAACCTGGTGAACCCGGCCCAAAAGGTGAAGC TGGTGCACCTGGAATTCCAGGAGGCAAGGGTGATTCTGGTGCCCCCGGTGAACGTGGACC TCCTGGTGCAGTAGGTCCCTCAGGACCTAGAGGTGGAGCTGGCCCCCCTGGTCCCGAAGG AGGAAAGGGCCCTGCTGGTCCCCCTGGGCCGCCTGGTGCCGCTGGTACACCTGGTCTGCA AGGGATGCCTGGAGAAAGAGGAGGTTCTGGAGGCCCCGGCCCAAAGGGTGACAAGGGTGA CCCTGGCGGTTCAGGTGCTGATGGTGCTCCAGGAAAAGATGGTCCAAGGGGTCCTACTGG TCCCATTGGTCCCCCTGGTCCAGCTGGTCAGCCTGGAGATAAGGGTGAAAGTGGTGCCCC TGGACTTCCTGGTATAGCTGGTCCTCGTGGTGGCCCTGGTGAGAGAGGTGAACATGGGCC ACCAGGACCTGCCGGCTTCCCTGGTGCTCCTGGCCAGAACGGTGAGCCTGGTGCCAAAGG AGAAAGAGGCGCTCCTGGTGAGAAAGGTGAAGGAGGACCTCCTGGGATTGCAGGACAGCC CGGAGGCACTGGGCCTCCTGGTCCCCCTGGTCCCCAAGGTGTCAAAGGTGAACGTGGCAG TCCTGGTGGTCCTGGTGCTGCTGGGTTCCCCGGTGGTCGTGGTCTTCCTGGTCCTCCTGG CAGTAACGGTAACCCAGGCCCCCCTGGCTCCAGTGGTCCTCCAGGCAAAGATGGTCCCCC AGGTCCACCTGGTAGCAGTGGTGCTCCTGGCAGCCCTGGAGTATCTGGACCGAAAGGTGA TGCCGGTCAACCAGGTGAAAAAGGATCACCTGGCCCCCAGGGCCCTCCGGGAGCTCCAGG CCCAGGTGGAATTTCAGGGATTACTGGAGCACGAGGTCTCGCAGGCCCACCAGGCATGCC AGGTGCTAGGGGAAGCCCTGGCCCACAGGGCGTCAAGGGTGAAAATGGAAAACCAGGACC TAGTGGTCTCAATGGAGAACGTGGTCCTCCTGGACCCCAGGGTCTTCCTGGTCTGGCTGG TGCAGCTGGTGAACCTGGACGAGATGGAAACCCTGGATCAGATGGTCTGCCAGGCCGAGA CGGAGCTCCCGGTAGCAAGGGCGATCGTGGTGAAAATGGCTCTCCTGGTGCCCCTGGTGC TCCTGGTCACCCAGGCCCACCTGGCCCTGTTGGTCCTGCTGGAAAGAATGGTGACAGAGG AGAAACTGGCCCTGCTGGTCCTGCTGGTGCTCCAGGTCCTGCTGGTTCAAGAGGTGCTCC TGGTCCCCAAGGCCCACGCGGTGACAAAGGTGAAACCGGTGAACGTGGTGCTAATGGCAT CAAAGGACATCGAGGATTCCCTGGTAATCCAGGTGCCCCAGGTTCTCCAGGTCCCGCTGG TCACCAAGGTGCAGTAGGTAGCCCAGGACCTGCAGGCCCCAGAGGACCTGTTGGACCGAG TGGGCCCCCTGGCAAAGATGGAGCAAGTGGACACCCTGGTCCCATTGGACCACCAGGGCC TCGAGGTAACAGAGGTGAAAGAGGATCTGAGGGCTCCCCAGGCCATCCAGGACAACCAGG CCCTCCTGGACCCCCTGGTGCCCCTGGTCCATGTTGTGGTGGTGGGGCTGCTGCCATCGC TGGTGTTGGAGGTGAAAAAGCTGGTGGTTTTGCCCCATATTATGGAGATGAACCAATGGA TTTCAAAATCAACACCGACGAGATTATGACTTCACTTAAATCCGTCAACGGACAAATAGA AAGCCTCATTAGTCCCGATGGTTCTCGTAAAAACCCTGCTCGTAACTGCAGAGACCTAAA ATTCTGCCATCCTGAGCTCAAGAGCGGAGAATATTGGGTTGATCCTAACCAAGGCTGCAA AATGGATGCTATTAAAGTATTTTGTAACATGGAAACTGGGGAAACATGCATAAGTGCCAG TCCTTCTACTGTTCCACGTAAGAACTGGTGGACAGATTCTGGTGCTGAGAAGAAATATGT TTGGTTTGGAGAATCCATGAATGGTGGTTTTCAGTTTAGCTATGGCAATCCTGAACTTCC TGAAGATGTCCTTGATGTCCAGTTGGCATTCCTTCGACTTCTCTCTAGCCGAGCTTCCCA GAACATCACATATCACTGCAAGAATAGCATTGCGTACATGGAACATGCCAGTGGGAATGT AAAGAAAGCCTTGAGGCTGATGGGATCAAATGAAGGTGAATTCAAGGCTGAAGGAAATAG CAAATTCACATACACCGTTCTGGAGGATGGTTGCACTAAACACACTGGGGAATGGGGCAA GACAGTCTTCGAATATCGAACACGCAAGGCTGTGAGACTACCTATTGTAGATATTGCACC CTATGATATTGGTGGTCCTGATCAAGAATTTGGTGCGGACATTGGCCCTGTTTGCTTTTT ATAAACCAAACTCTATCTGAATTCCCAGCAAAAGATTTCACACTCCATATGTGTTCCTTT TGTTCTCATCTTGTCAACCAGTACAAGTGACCAACTAAATTCCAGTTATTTATTTCCAAA ATTTTTGGAAAAAGGATAATTTGACCTAAAAAGGATACTTTTTTCTGTCACACCAAATAC AGTTCGAATGCTTTTTGTTCTATTTTTTTACCAGTTCCAATTTCAAATGTCTCAATGGTG CTATAATAAATAAACTTCAACACTCTTCCAATTACACTGCGTTACATTCTTTGAATCCTA GCCCATTTGCAAAGCAATGACTATGTTTATCGTTAAAAGATAACCATTCTTTCTGAAATA GTCAAACACGCAATTCAAAAAGACCTCCCTGTTTCAACTACCTCAACCTGGTCAGAAACA CAAAAGTCCCAGAAGATGAAAAACATTTCTATAAAATGCCAAAACTTATACATTTCCCTG ATTAATTTTCTAAAAT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 9 entry(ies) | More info |
| Predicted RNA structure(s): 9 entry(ies) | Help | Less info |
| Predicted RNA structure(s): 9 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| Aligned organism(s): 106 entry(ies) | More info |
| Aligned organism(s): 106 entry(ies) | Help | Less info |
| 252-356, gnl|bosTau2|chr2 (3137675-3137571) | |
| 252-356, gnl|Hg17|chr2 (189683588-189683692) | |
| 252-356, gnl|Mm7|chr1 (45567753-45567857) | |
| 400-500, gnl|bosTau2|chr2 (3136664-3136564) | |
| 400-500, gnl|canFam2|chr36 (33537643-33537971) | |
| 400-500, gnl|danRer3|chrUn (140991706-140991396) | |
| 400-500, gnl|dasNov1|scaffold_54137 (4558-4240) | |
| 400-500, gnl|echTel1|scaffold_295830 (25568-25900) | |
| 400-500, gnl|fr1|chrUn (208432053-208431719) | |
| 400-500, gnl|galGal2|chr7 (560668-560386) | |
| 400-500, gnl|hg17|chr2 (189684238-189684571) | |
| 400-500, gnl|Hg17|chr2 (189684465-189684565) | |
| 400-500, gnl|loxAfr1|scaffold_161498 (31-336) | |
| 400-500, gnl|mm7|chr1 (45568139-45568435) | |
| 400-500, gnl|Mm7|chr1 (45568329-45568429) | |
| 400-500, gnl|monDom2|scaffold_2 (94282284-94282621) | |
| 400-500, gnl|oryCun1|scaffold_199521 (248156-247823) | |
| 400-500, gnl|panTro1|chr13 (79555550-79555883) | |
| 400-500, gnl|rheMac2|chr12 (52635622-52635955) | |
| 400-500, gnl|rn3|chr9 (44302216-44302508) | |
| 400-500, gnl|tetNig1|chr9 (7668130-7668367) | |
| 400-500, gnl|xenTro1|scaffold_48 (614597-614865) | |
| 554-670, gnl|bosTau2|chr2 (3136194-3136079) | |
| 554-670, gnl|Hg17|chr2 (189684956-189685071) | |
| 554-670, gnl|Mm7|chr1 (45568787-45568902) | |
| 714-815, gnl|bosTau2|chr2 (3135253-3135152) | |
| 714-815, gnl|Hg17|chr2 (189685922-189686023) | |
| 714-815, gnl|Mm7|chr1 (45570213-45570314) | |
| 869-976, gnl|bosTau2|chr2 (3134325-3134217) | |
| 869-976, gnl|Hg17|chr2 (189686630-189686738) | |
| 869-976, gnl|Mm7|chr1 (45570866-45570974) | |
| 1326-1436, gnl|bosTau2|chr2 (3131468-3131358) | |
| 1326-1436, gnl|canFam2|chr36 (33542526-33542642) | |
| 1326-1436, gnl|danRer3|chr2 (21266671-21266788) | |
| 1326-1436, gnl|dasNov1|scaffold_1007 (39613-39729) | |
| 1326-1436, gnl|echTel1|scaffold_295830 (30642-30759) | |
| 1326-1436, gnl|fr1|chrUn (208429047-208428932) | |
| 1326-1436, gnl|galGal2|chr7 (553971-553855) | |
| 1326-1436, gnl|hg17|chr2 (189689696-189689813) | |
| 1326-1436, gnl|Hg17|chr2 (189689700-189689810) | |
| 1326-1436, gnl|loxAfr1|scaffold_56005 (767-884) | |
| 1326-1436, gnl|mm7|chr1 (45574072-45574189) | |
| 1326-1436, gnl|Mm7|chr1 (45574076-45574204) | |
| 1326-1436, gnl|monDom2|scaffold_2 (94292525-94292642) | |
| 1326-1436, gnl|oryCun1|scaffold_210052 (65620-65737) | |
| 1326-1436, gnl|panTro1|chr13 (79561000-79561117) | |
| 1326-1436, gnl|rheMac2|chr12 (52640764-52640881) | |
| 1326-1436, gnl|rn3|chr9 (44307755-44307872) | |
| 1326-1436, gnl|tetNig1|chr9 (7670533-7670646) | |
| 1326-1436, gnl|xenTro1|scaffold_136 (152839-152954) | |
| 1652-1756, gnl|bosTau2|chr2 (3127735-3127631) | |
| 1652-1756, gnl|Hg17|chr2 (189693187-189693291) | |
| 1652-1756, gnl|Mm7|chr1 (45576526-45576630) | |
| 1868-2030, gnl|bosTau2|chr2 (3126606-3126444) | |
| 1868-2030, gnl|Hg17|chr2 (189694214-189694376) | |
| 1868-2030, gnl|Mm7|chr1 (45577518-45577680) | |
| 2136-2249, gnl|bosTau2|chr2 (3125249-3125136) | |
| 2136-2249, gnl|canFam2|chr36 (33547828-33547948) | |
| 2136-2249, gnl|danRer3|chr2 (21269912-21270025) | |
| 2136-2249, gnl|dasNov1|scaffold_1007 (94099-93979) | |
| 2136-2249, gnl|echTel1|scaffold_239717 (2859-2979) | |
| 2136-2249, gnl|fr1|chrUn (208427265-208427145) | |
| 2136-2249, gnl|galGal2|chr7 (547765-547647) | |
| 2136-2249, gnl|hg17|chr2 (189695580-189695700) | |
| 2136-2249, gnl|Hg17|chr2 (189695580-189695693) | |
| 2136-2249, gnl|loxAfr1|scaffold_56005 (7009-7129) | |
| 2136-2249, gnl|mm7|chr1 (45578773-45578893) | |
| 2136-2249, gnl|Mm7|chr1 (45578773-45578886) | |
| 2136-2249, gnl|monDom2|scaffold_2 (94298896-94299016) | |
| 2136-2249, gnl|oryCun1|scaffold_210052 (72275-72395) | |
| 2136-2249, gnl|panTro1|chr13 (79566882-79567002) | |
| 2136-2249, gnl|rheMac2|chr12 (52646687-52646807) | |
| 2136-2249, gnl|rn3|chr9 (44312357-44312477) | |
| 2136-2249, gnl|tetNig1|chr9 (7672260-7672377) | |
| 2136-2249, gnl|xenTro1|scaffold_48 (631002-631121) | |
| 2298-2408, gnl|bosTau2|chr2 (3124133-3124023) | |
| 2298-2408, gnl|Hg17|chr2 (189696575-189696685) | |
| 2298-2408, gnl|Mm7|chr1 (45580044-45580154) | |
| 2462-2568, gnl|bosTau2|chr2 (3123097-3122991) | |
| 2462-2568, gnl|canFam2|chr36 (33549540-33549655) | |
| 2462-2568, gnl|danRer3|chrUn (140984316-140984202) | |
| 2462-2568, gnl|dasNov1|scaffold_1007 (92177-92062) | |
| 2462-2568, gnl|echTel1|scaffold_300375 (2450-2565) | |
| 2462-2568, gnl|fr1|chrUn (208426445-208426330) | |
| 2462-2568, gnl|galGal2|chr7 (545943-545828) | |
| 2462-2568, gnl|hg17|chr2 (189697731-189697846) | |
| 2462-2568, gnl|Hg17|chr2 (189697732-189697838) | |
| 2462-2568, gnl|loxAfr1|scaffold_56005 (9094-9209) | |
| 2462-2568, gnl|mm7|chr1 (45581110-45581225) | |
| 2462-2568, gnl|Mm7|chr1 (45581111-45581217) | |
| 2462-2568, gnl|monDom2|scaffold_2 (94302864-94302979) | |
| 2462-2568, gnl|oryCun1|scaffold_210052 (74150-74265) | |
| 2462-2568, gnl|panTro1|chr13 (79568998-79569113) | |
| 2462-2568, gnl|rheMac2|chr12 (52648733-52648848) | |
| 2462-2568, gnl|rn3|chr9 (44314652-44314767) | |
| 2462-2568, gnl|tetNig1|chr2 (682953-682838) | |
| 2462-2568, gnl|xenTro1|scaffold_136 (164385-164500) | |
| 2730-3027, gnl|bosTau2|chr2 (3121512-3121212) | |
| 2730-3027, gnl|Hg17|chr2 (189699154-189699454) | |
| 2730-3027, gnl|Mm7|chr1 (45582498-45582795) | |
| 3258-3456, gnl|bosTau2|chr19 (29188505-29188703) | |
| 3258-3456, gnl|Hg17|chr17 (45618337-45618139) | |
| 3258-3456, gnl|Mm7|chr11 (95060183-95060381) | |
| 3458-4068, gnl|bosTau2|chr2 (3118979-3118361) | |
| 3458-4068, gnl|Hg17|chr2 (189701860-189702494) | |
| 3458-4068, gnl|Mm7|chr1 (45585252-45585875) |
| Aligned organism(s): 106 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 252-356, gnl|bosTau2|chr2 (3137675-3137571) | |
| 252-356, gnl|Hg17|chr2 (189683588-189683692) | |
| 252-356, gnl|Mm7|chr1 (45567753-45567857) | |
| 400-500, gnl|bosTau2|chr2 (3136664-3136564) | |
| 400-500, gnl|canFam2|chr36 (33537643-33537971) | |
| 400-500, gnl|danRer3|chrUn (140991706-140991396) | |
| 400-500, gnl|dasNov1|scaffold_54137 (4558-4240) | |
| 400-500, gnl|echTel1|scaffold_295830 (25568-25900) | |
| 400-500, gnl|fr1|chrUn (208432053-208431719) | |
| 400-500, gnl|galGal2|chr7 (560668-560386) | |
| 400-500, gnl|hg17|chr2 (189684238-189684571) | |
| 400-500, gnl|Hg17|chr2 (189684465-189684565) | |
| 400-500, gnl|loxAfr1|scaffold_161498 (31-336) | |
| 400-500, gnl|mm7|chr1 (45568139-45568435) | |
| 400-500, gnl|Mm7|chr1 (45568329-45568429) | |
| 400-500, gnl|monDom2|scaffold_2 (94282284-94282621) | |
| 400-500, gnl|oryCun1|scaffold_199521 (248156-247823) | |
| 400-500, gnl|panTro1|chr13 (79555550-79555883) | |
| 400-500, gnl|rheMac2|chr12 (52635622-52635955) | |
| 400-500, gnl|rn3|chr9 (44302216-44302508) | |
| 400-500, gnl|tetNig1|chr9 (7668130-7668367) | |
| 400-500, gnl|xenTro1|scaffold_48 (614597-614865) | |
| 554-670, gnl|bosTau2|chr2 (3136194-3136079) | |
| 554-670, gnl|Hg17|chr2 (189684956-189685071) | |
| 554-670, gnl|Mm7|chr1 (45568787-45568902) | |
| 714-815, gnl|bosTau2|chr2 (3135253-3135152) | |
| 714-815, gnl|Hg17|chr2 (189685922-189686023) | |
| 714-815, gnl|Mm7|chr1 (45570213-45570314) | |
| 869-976, gnl|bosTau2|chr2 (3134325-3134217) | |
| 869-976, gnl|Hg17|chr2 (189686630-189686738) | |
| 869-976, gnl|Mm7|chr1 (45570866-45570974) | |
| 1326-1436, gnl|bosTau2|chr2 (3131468-3131358) | |
| 1326-1436, gnl|canFam2|chr36 (33542526-33542642) | |
| 1326-1436, gnl|danRer3|chr2 (21266671-21266788) | |
| 1326-1436, gnl|dasNov1|scaffold_1007 (39613-39729) | |
| 1326-1436, gnl|echTel1|scaffold_295830 (30642-30759) | |
| 1326-1436, gnl|fr1|chrUn (208429047-208428932) | |
| 1326-1436, gnl|galGal2|chr7 (553971-553855) | |
| 1326-1436, gnl|hg17|chr2 (189689696-189689813) | |
| 1326-1436, gnl|Hg17|chr2 (189689700-189689810) | |
| 1326-1436, gnl|loxAfr1|scaffold_56005 (767-884) | |
| 1326-1436, gnl|mm7|chr1 (45574072-45574189) | |
| 1326-1436, gnl|Mm7|chr1 (45574076-45574204) | |
| 1326-1436, gnl|monDom2|scaffold_2 (94292525-94292642) | |
| 1326-1436, gnl|oryCun1|scaffold_210052 (65620-65737) | |
| 1326-1436, gnl|panTro1|chr13 (79561000-79561117) | |
| 1326-1436, gnl|rheMac2|chr12 (52640764-52640881) | |
| 1326-1436, gnl|rn3|chr9 (44307755-44307872) | |
| 1326-1436, gnl|tetNig1|chr9 (7670533-7670646) | |
| 1326-1436, gnl|xenTro1|scaffold_136 (152839-152954) | |
| 1652-1756, gnl|bosTau2|chr2 (3127735-3127631) | |
| 1652-1756, gnl|Hg17|chr2 (189693187-189693291) | |
| 1652-1756, gnl|Mm7|chr1 (45576526-45576630) | |
| 1868-2030, gnl|bosTau2|chr2 (3126606-3126444) | |
| 1868-2030, gnl|Hg17|chr2 (189694214-189694376) | |
| 1868-2030, gnl|Mm7|chr1 (45577518-45577680) | |
| 2136-2249, gnl|bosTau2|chr2 (3125249-3125136) | |
| 2136-2249, gnl|canFam2|chr36 (33547828-33547948) | |
| 2136-2249, gnl|danRer3|chr2 (21269912-21270025) | |
| 2136-2249, gnl|dasNov1|scaffold_1007 (94099-93979) | |
| 2136-2249, gnl|echTel1|scaffold_239717 (2859-2979) | |
| 2136-2249, gnl|fr1|chrUn (208427265-208427145) | |
| 2136-2249, gnl|galGal2|chr7 (547765-547647) | |
| 2136-2249, gnl|hg17|chr2 (189695580-189695700) | |
| 2136-2249, gnl|Hg17|chr2 (189695580-189695693) | |
| 2136-2249, gnl|loxAfr1|scaffold_56005 (7009-7129) | |
| 2136-2249, gnl|mm7|chr1 (45578773-45578893) | |
| 2136-2249, gnl|Mm7|chr1 (45578773-45578886) | |
| 2136-2249, gnl|monDom2|scaffold_2 (94298896-94299016) | |
| 2136-2249, gnl|oryCun1|scaffold_210052 (72275-72395) | |
| 2136-2249, gnl|panTro1|chr13 (79566882-79567002) | |
| 2136-2249, gnl|rheMac2|chr12 (52646687-52646807) | |
| 2136-2249, gnl|rn3|chr9 (44312357-44312477) | |
| 2136-2249, gnl|tetNig1|chr9 (7672260-7672377) | |
| 2136-2249, gnl|xenTro1|scaffold_48 (631002-631121) | |
| 2298-2408, gnl|bosTau2|chr2 (3124133-3124023) | |
| 2298-2408, gnl|Hg17|chr2 (189696575-189696685) | |
| 2298-2408, gnl|Mm7|chr1 (45580044-45580154) | |
| 2462-2568, gnl|bosTau2|chr2 (3123097-3122991) | |
| 2462-2568, gnl|canFam2|chr36 (33549540-33549655) | |
| 2462-2568, gnl|danRer3|chrUn (140984316-140984202) | |
| 2462-2568, gnl|dasNov1|scaffold_1007 (92177-92062) | |
| 2462-2568, gnl|echTel1|scaffold_300375 (2450-2565) | |
| 2462-2568, gnl|fr1|chrUn (208426445-208426330) | |
| 2462-2568, gnl|galGal2|chr7 (545943-545828) | |
| 2462-2568, gnl|hg17|chr2 (189697731-189697846) | |
| 2462-2568, gnl|Hg17|chr2 (189697732-189697838) | |
| 2462-2568, gnl|loxAfr1|scaffold_56005 (9094-9209) | |
| 2462-2568, gnl|mm7|chr1 (45581110-45581225) | |
| 2462-2568, gnl|Mm7|chr1 (45581111-45581217) | |
| 2462-2568, gnl|monDom2|scaffold_2 (94302864-94302979) | |
| 2462-2568, gnl|oryCun1|scaffold_210052 (74150-74265) | |
| 2462-2568, gnl|panTro1|chr13 (79568998-79569113) | |
| 2462-2568, gnl|rheMac2|chr12 (52648733-52648848) | |
| 2462-2568, gnl|rn3|chr9 (44314652-44314767) | |
| 2462-2568, gnl|tetNig1|chr2 (682953-682838) | |
| 2462-2568, gnl|xenTro1|scaffold_136 (164385-164500) | |
| 2730-3027, gnl|bosTau2|chr2 (3121512-3121212) | |
| 2730-3027, gnl|Hg17|chr2 (189699154-189699454) | |
| 2730-3027, gnl|Mm7|chr1 (45582498-45582795) | |
| 3258-3456, gnl|bosTau2|chr19 (29188505-29188703) | |
| 3258-3456, gnl|Hg17|chr17 (45618337-45618139) | |
| 3258-3456, gnl|Mm7|chr11 (95060183-95060381) | |
| 3458-4068, gnl|bosTau2|chr2 (3118979-3118361) | |
| 3458-4068, gnl|Hg17|chr2 (189701860-189702494) | |
| 3458-4068, gnl|Mm7|chr1 (45585252-45585875) |
| Expressed library(ies): 79 entry(ies) | More info |
| Expressed library(ies): 79 entry(ies) | Help | Less info |
| ski (99.4864) | |
| csk (67.4173) | |
| fat (43.1962) | |
| amn (21.3033) | |
| jca (20.1709) | |
| eru (16.4466) | |
| ova (10.9762) | |
| eep (9.92769) | |
| nep (9.38017) | |
| bla (9.07734) | |
| rec (8.48044) | |
| aor (8.3968) | |
| liv (7.75307) | |
| lin (7.71695) | |
| ese (6.57811) | |
| gul (6.39318) | |
| tbr (6.01295) | |
| bfe (4.9453) | |
| nms (4.91873) | |
| sme (4.58155) | |
| eye (4.43308) | |
| isp (4.21053) | |
| hea (4.08998) | |
| ste (4.05625) | |
| tra (3.81585) | |
| mgp (3.69089) | |
| ssp (2.98143) | |
| mga (2.88369) | |
| nca (2.87435) | |
| clu (2.51256) | |
| ute (2.39012) | |
| vin (2.3279) | |
| med (2.32504) | |
| eje (2.17434) | |
| spl (2.14777) | |
| ton (2.106) | |
| nco (2.10254) | |
| ret (2.05973) | |
| nmm (1.85923) | |
| sug (1.78208) | |
| ldo (1.74605) | |
| nlu (1.72513) | |
| cly (1.68899) | |
| cmu (1.67754) | |
| mgm (1.62308) | |
| elu (1.54143) | |
| pro (1.5361) | |
| cut (1.52931) | |
| cst (1.26033) | |
| sin (1.22463) | |
| pty (1.14172) | |
| cga (1.11638) | |
| hlv (1.11405) | |
| lun (0.902935) | |
| che (0.817884) | |
| spc (0.793561) | |
| lyg (0.665513) | |
| nje (0.66368) | |
| cov (0.660764) | |
| kid (0.648677) | |
| thg (0.633955) | |
| mas (0.630915) | |
| fcc (0.593354) | |
| sto (0.539471) | |
| fty (0.527519) | |
| cty (0.5204) | |
| mcp (0.511945) | |
| lnt (0.426925) | |
| jej (0.395687) | |
| sag (0.36543) | |
| pgl (0.35545) | |
| cte (0.29274) | |
| cbe (0.239234) | |
| ebs (0.236602) | |
| tes (0.207814) | |
| fli (0.202881) | |
| nbm (0.198649) | |
| cki (0.165235) | |
| ctl (0.153069) |
| Expressed library(ies): 79 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ski (99.4864) | |
| csk (67.4173) | |
| fat (43.1962) | |
| amn (21.3033) | |
| jca (20.1709) | |
| eru (16.4466) | |
| ova (10.9762) | |
| eep (9.92769) | |
| nep (9.38017) | |
| bla (9.07734) | |
| rec (8.48044) | |
| aor (8.3968) | |
| liv (7.75307) | |
| lin (7.71695) | |
| ese (6.57811) | |
| gul (6.39318) | |
| tbr (6.01295) | |
| bfe (4.9453) | |
| nms (4.91873) | |
| sme (4.58155) | |
| eye (4.43308) | |
| isp (4.21053) | |
| hea (4.08998) | |
| ste (4.05625) | |
| tra (3.81585) | |
| mgp (3.69089) | |
| ssp (2.98143) | |
| mga (2.88369) | |
| nca (2.87435) | |
| clu (2.51256) | |
| ute (2.39012) | |
| vin (2.3279) | |
| med (2.32504) | |
| eje (2.17434) | |
| spl (2.14777) | |
| ton (2.106) | |
| nco (2.10254) | |
| ret (2.05973) | |
| nmm (1.85923) | |
| sug (1.78208) | |
| ldo (1.74605) | |
| nlu (1.72513) | |
| cly (1.68899) | |
| cmu (1.67754) | |
| mgm (1.62308) | |
| elu (1.54143) | |
| pro (1.5361) | |
| cut (1.52931) | |
| cst (1.26033) | |
| sin (1.22463) | |
| pty (1.14172) | |
| cga (1.11638) | |
| hlv (1.11405) | |
| lun (0.902935) | |
| che (0.817884) | |
| spc (0.793561) | |
| lyg (0.665513) | |
| nje (0.66368) | |
| cov (0.660764) | |
| kid (0.648677) | |
| thg (0.633955) | |
| mas (0.630915) | |
| fcc (0.593354) | |
| sto (0.539471) | |
| fty (0.527519) | |
| cty (0.5204) | |
| mcp (0.511945) | |
| lnt (0.426925) | |
| jej (0.395687) | |
| sag (0.36543) | |
| pgl (0.35545) | |
| cte (0.29274) | |
| cbe (0.239234) | |
| ebs (0.236602) | |
| tes (0.207814) | |
| fli (0.202881) | |
| nbm (0.198649) | |
| cki (0.165235) | |
| ctl (0.153069) |