Ss1.1-rfat0107_a23.5
|
TTCCGGTCTTTCGGCTTTCGGCTCGGAGGAGGCTACGGTGCAACTTTCTTCGGTCGTCCC
GAATCCGGGTTCATCCGACACCAGCCGCCTCCACCATGCCGCCTAAGTTCGACCCCAACG
AGATCAAAGTCGTGTATCTGAGATGCACCGGTGGAGAAGTCGGGGCTACATCTGCCCTGG
CCCCCAAGATCGGCCCCCTGGGTCTGTCTCCAAAAAAGGTTGGTGATGACATTGCCAAGG
CAACTGGTGATTGGAAGGGTCTGAGAATTACAGTGAAACTGACCATTCAGAACAGACAAG
CCCAGATCGAGGTGGTACCTTCTGCCTCTGCCCTGATCATCAAAGCTCTAAAGGAACCTC
CAAGAGACAGAAAGAAGCAGAAAAACATTAAGCACAGTGGAAACATCACTTTTGATGAGA
TTGTCAACATTGCCCGGCAGATGCGGCACCGCTCTTTAGCTAGAGAGCTTTCTGGAACCA
TTAAAGAGATCCTGGGGACTGCTCAGTCTGTGGGATGCAATGTTGATGGCCGCCACCCTC
ATGACATCATAGATGACATCAACAGTGGTGCAGTGGAATGCCCAGCTAGCTAAGAACTGC
AAAGAAAAATAAAGATTATTTGACAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTCCGGTCTTTCGGCTTTCGGCTCGGAGGAGGCTACGGTGCAACTTTCTTCGGTCGTCCC
GAATCCGGGTTCATCCGACACCAGCCGCCTCCACCATGCCGCCTAAGTTCGACCCCAACG
AGATCAAAGTCGTGTATCTGAGATGCACCGGTGGAGAAGTCGGGGCTACATCTGCCCTGG
CCCCCAAGATCGGCCCCCTGGGTCTGTCTCCAAAAAAGGTTGGTGATGACATTGCCAAGG
CAACTGGTGATTGGAAGGGTCTGAGAATTACAGTGAAACTGACCATTCAGAACAGACAAG
CCCAGATCGAGGTGGTACCTTCTGCCTCTGCCCTGATCATCAAAGCTCTAAAGGAACCTC
CAAGAGACAGAAAGAAGCAGAAAAACATTAAGCACAGTGGAAACATCACTTTTGATGAGA
TTGTCAACATTGCCCGGCAGATGCGGCACCGCTCTTTAGCTAGAGAGCTTTCTGGAACCA
TTAAAGAGATCCTGGGGACTGCTCAGTCTGTGGGATGCAATGTTGATGGCCGCCACCCTC
ATGACATCATAGATGACATCAACAGTGGTGCAGTGGAATGCCCAGCTAGCTAAGAACTGC
AAAGAAAAATAAAGATTATTTGACAACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
|
|
gi|45268981|gb|AAS55903.1| |
Protein identifier
|
gi|45268981|gb|AAS55903.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
cut (3.73832) |
|
nca (3.55872) |
|
eje (3.55802) |
|
nco (3.07294) |
|
sto (2.87718) |
|
sme (2.74893) |
|
bla (2.73564) |
|
nlu (2.68353) |
|
sag (2.55801) |
|
aor (2.34329) |
|
cje (2.31328) |
|
elu (2.31214) |
|
thg (2.28224) |
|
cag (2.26792) |
|
pgl (2.25118) |
|
nep (2.2071) |
|
che (2.04471) |
|
fli (2.02881) |
|
csk (1.97044) |
|
fat (1.91656) |
|
mgp (1.84544) |
|
ecc (1.84056) |
|
csp (1.77305) |
|
nms (1.71086) |
|
mcp (1.70648) |
|
cst (1.68044) |
|
cbe (1.67464) |
|
nje (1.6592) |
|
ese (1.64453) |
|
ill (1.58033) |
|
lnt (1.56539) |
|
med (1.51128) |
|
lyg (1.46413) |
|
ova (1.42045) |
|
sug (1.4002) |
|
rec (1.38456) |
|
eli (1.36633) |
|
cly (1.32706) |
|
amn (1.25313) |
|
ton (1.2285) |
|
hea (1.22699) |
|
eep (1.22564) |
|
duo (1.20961) |
|
ebs (1.18301) |
|
mga (1.12144) |
|
cga (1.11638) |
|
hlv (1.11405) |
|
nbm (1.09257) |
|
ssp (1.08416) |
|
eru (1.08043) |
|
fty (1.05504) |
|
pro (1.02407) |
|
cki (0.991408) |
|
col (0.975039) |
|
nmm (0.929615) |
|
jej (0.890296) |
|
gul (0.887942) |
|
ski (0.880411) |
|
pty (0.856287) |
|
mas (0.84122) |
|
fce (0.814775) |
|
cov (0.792917) |
|
cmu (0.745573) |
|
fbs (0.701385) |
|
ece (0.687916) |
|
fhi (0.678311) |
|
tes (0.623441) |
|
spc (0.566829) |
|
ste (0.540833) |
|
pan (0.471921) |
|
cli (0.458435) |
|
jca (0.45584) |
|
fcc (0.39557) |
|
eye (0.341006) |
|
isp (0.300752) |
|
bfe (0.299715) |
|
cte (0.29274) |
|
hyp (0.285673) |
|
ute (0.265569) |
|
sin (0.174948) |
|
lun (0.150489) |
|
spl (0.143184) |
|
tra (0.123092) |
|
cty (0.10408) |
|
ldo (0.0970026) |
|
cut (3.73832) |
|
nca (3.55872) |
|
eje (3.55802) |
|
nco (3.07294) |
|
sto (2.87718) |
|
sme (2.74893) |
|
bla (2.73564) |
|
nlu (2.68353) |
|
sag (2.55801) |
|
aor (2.34329) |
|
cje (2.31328) |
|
elu (2.31214) |
|
thg (2.28224) |
|
cag (2.26792) |
|
pgl (2.25118) |
|
nep (2.2071) |
|
che (2.04471) |
|
fli (2.02881) |
|
csk (1.97044) |
|
fat (1.91656) |
|
mgp (1.84544) |
|
ecc (1.84056) |
|
csp (1.77305) |
|
nms (1.71086) |
|
mcp (1.70648) |
|
cst (1.68044) |
|
cbe (1.67464) |
|
nje (1.6592) |
|
ese (1.64453) |
|
ill (1.58033) |
|
lnt (1.56539) |
|
med (1.51128) |
|
lyg (1.46413) |
|
ova (1.42045) |
|
sug (1.4002) |
|
rec (1.38456) |
|
eli (1.36633) |
|
cly (1.32706) |
|
amn (1.25313) |
|
ton (1.2285) |
|
hea (1.22699) |
|
eep (1.22564) |
|
duo (1.20961) |
|
ebs (1.18301) |
|
mga (1.12144) |
|
cga (1.11638) |
|
hlv (1.11405) |
|
nbm (1.09257) |
|
ssp (1.08416) |
|
eru (1.08043) |
|
fty (1.05504) |
|
pro (1.02407) |
|
cki (0.991408) |
|
col (0.975039) |
|
nmm (0.929615) |
|
jej (0.890296) |
|
gul (0.887942) |
|
ski (0.880411) |
|
pty (0.856287) |
|
mas (0.84122) |
|
fce (0.814775) |
|
cov (0.792917) |
|
cmu (0.745573) |
|
fbs (0.701385) |
|
ece (0.687916) |
|
fhi (0.678311) |
|
tes (0.623441) |
|
spc (0.566829) |
|
ste (0.540833) |
|
pan (0.471921) |
|
cli (0.458435) |
|
jca (0.45584) |
|
fcc (0.39557) |
|
eye (0.341006) |
|
isp (0.300752) |
|
bfe (0.299715) |
|
cte (0.29274) |
|
hyp (0.285673) |
|
ute (0.265569) |
|
sin (0.174948) |
|
lun (0.150489) |
|
spl (0.143184) |
|
tra (0.123092) |
|
cty (0.10408) |
|
ldo (0.0970026) |
