Non-Coding RNA Search

Ss1.1-rfat0109_b12.5

Sequence:


               
               TTTCATTTTAACATATTTTATAACTGATACATCTCAAGGCCCTCCACATAAAATTATTTG
AAGAGTTTCACCAGAGAGGAATGTTATTCTTGCTTATATTTTGTTAATAAAATGATCAAA
TGCTCATTGAATCAGTGATTTTTTTTCATTGACAAGTTTTTTTTTCTGATAATACTGTCT
CCAGTTGTTTATAGAATTATTATAATGAATTATTAGTGGCTTTTTATTTGTAACTGCAGA
CCAAAAGAGGTGAACCACTTCAATTTAACATTTCTGCTTTGTTAATTAGATGATATAAAC
CCTTCTTAGGAGCTGCCCTTTTTTTTTTTTTTAAAGTAGAGAAATTATTTCAAGTTTCAT
ATTATGGCTTGAACAAAATAGATGTGTGTAGTTTTTTTCACAAGTGGTGAAACTAGATGT
ATGTTAGTCTTTAAACAGATACACAGCTATATTATTTATAATTAGGGCTTCTCTCATTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCATTTTAACATATTTTATAACTGATACATCTCAAGGCCCTCCACATAAAATTATTTG
AAGAGTTTCACCAGAGAGGAATGTTATTCTTGCTTATATTTTGTTAATAAAATGATCAAA
TGCTCATTGAATCAGTGATTTTTTTTCATTGACAAGTTTTTTTTTCTGATAATACTGTCT
CCAGTTGTTTATAGAATTATTATAATGAATTATTAGTGGCTTTTTATTTGTAACTGCAGA
CCAAAAGAGGTGAACCACTTCAATTTAACATTTCTGCTTTGTTAATTAGATGATATAAAC
CCTTCTTAGGAGCTGCCCTTTTTTTTTTTTTTAAAGTAGAGAAATTATTTCAAGTTTCAT
ATTATGGCTTGAACAAAATAGATGTGTGTAGTTTTTTTCACAAGTGGTGAAACTAGATGT
ATGTTAGTCTTTAAACAGATACACAGCTATATTATTTATAATTAGGGCTTCTCTCATTGA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-480, gnl|bosTau2|chr2 (8262532-8262071)
               

               
               1-480, gnl|Hg17|chr2 (180635234-180634775)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-480, gnl|bosTau2|chr2 (8262532-8262071)
               

               
               1-480, gnl|Hg17|chr2 (180635234-180634775)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fat (0.147427)
               

               
               tra (0.123092)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)
               

               
               tra (0.123092)

	1-480, gnl\|bosTau2\|chr2 (8262532-8262071)
	1-480, gnl\|Hg17\|chr2 (180635234-180634775)