Non-Coding RNA Search

Ss1.1-rfat0109_h11.5

Sequence:


               
               CTTGAGAAAAGTTTACATGTGGAATAAAATTGCTTAATGTTGAAAAATTTTCCTTTGTAA
CAATTCTAGTCACTGTTCATTAGGAAATTGCTTTATATTCTGTAAAGTAACTTGTGGTGA
AACTCCTAAGCAGAAGGAAAACTTAATATAACAATTTATATAATTTGAACTTCTAAATAT
AGATTATTTGAAAAATATATGTAATTCTTAGGTAATTTTCAAATCTTGATATTTGCTTAT
TCATTGAGGTAATGGTGCTACATTTTAAGAAAAATTTCTACATTGTTCCTACAGAATTTC
TTGAAGGTATTTTGTTTAAATCATTTCTATCAGTTGAACTGTTACCACTGCCTTTTTCTG
TTGCGAAATTGCCTCTTAAAATAGTGCTATTTTTAGGCTTATATTTCTCTGTGAACAAAA
TTTTCAAAGTACGAGATCACCTTAAAGTTATTTTAGATATCGACAGCATTTGAATCCCTT
GTGCTTAGAGTAGAAAATTGGTAGGTTAAAAAGCCCATGTAGACAAAAAATACAAGACAG
ATTCCCTTTTATTTGAATTGTTTCTTTATTCTCCTAATGCTAAAGTGTGTGAAATATGTA
GAGGATGTACAAAAGGAAATGAAAATAGACTTTGTACTTGGCTGGGGTTTATTTGTTTTG
TTTTTATTTTGGAGCACTTATAACCCTTCTTTTCACCTGAATAAGTTAAGGAAGTAGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTGAGAAAAGTTTACATGTGGAATAAAATTGCTTAATGTTGAAAAATTTTCCTTTGTAA
CAATTCTAGTCACTGTTCATTAGGAAATTGCTTTATATTCTGTAAAGTAACTTGTGGTGA
AACTCCTAAGCAGAAGGAAAACTTAATATAACAATTTATATAATTTGAACTTCTAAATAT
AGATTATTTGAAAAATATATGTAATTCTTAGGTAATTTTCAAATCTTGATATTTGCTTAT
TCATTGAGGTAATGGTGCTACATTTTAAGAAAAATTTCTACATTGTTCCTACAGAATTTC
TTGAAGGTATTTTGTTTAAATCATTTCTATCAGTTGAACTGTTACCACTGCCTTTTTCTG
TTGCGAAATTGCCTCTTAAAATAGTGCTATTTTTAGGCTTATATTTCTCTGTGAACAAAA
TTTTCAAAGTACGAGATCACCTTAAAGTTATTTTAGATATCGACAGCATTTGAATCCCTT
GTGCTTAGAGTAGAAAATTGGTAGGTTAAAAAGCCCATGTAGACAAAAAATACAAGACAG
ATTCCCTTTTATTTGAATTGTTTCTTTATTCTCCTAATGCTAAAGTGTGTGAAATATGTA
GAGGATGTACAAAAGGAAATGAAAATAGACTTTGTACTTGGCTGGGGTTTATTTGTTTTG
TTTTTATTTTGGAGCACTTATAACCCTTCTTTTCACCTGAATAAGTTAAGGAAGTAGGGG

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-718, gnl|bosTau2|chr3 (12350176-12349457)
               

               
               1-718, gnl|Hg17|chr12 (99237142-99237834)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-718, gnl|bosTau2|chr3 (12350176-12349457)
               

               
               1-718, gnl|Hg17|chr12 (99237142-99237834)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fat (0.147427)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)

	1-718, gnl\|bosTau2\|chr3 (12350176-12349457)
	1-718, gnl\|Hg17\|chr12 (99237142-99237834)