Non-Coding RNA Search

Ss1.1-rfat0114_h12.5

Sequence:


               
               ACTCCTAAAATCATTTTTAAAAATTATTCTAAGTAATGAACAAAAAAGAATGGAAGATTT
TAATGTAATATTGGAATCAGTCTATAATTCTCAATTATAAAAAACTTCAGTAACCTGAAA
CAGAATTTTCCCTAACCTTCTGACAAGTAACAAAATTAACTTCTATGATTTATATCAAAT
TTTACATTGTCATTCTCTTGGAAAGGTGTTAGTAAGTAATGAAATGGTCAAAAAACATGC
AGGAGGCTAAAATTCACTATAGTAAACAATAAAGAATAAGCTGTAAATTGGTATGGTTTG
GTATATGTGAATAGAACCAAAAATCATTATTGTGGGTATAAGGATAGATGTGGGGGTGGG
GGAACTTGCATGTTTGAAACAGTTTTTAATTATCGTGACATTATGTGATGTATTTTTTCT
TTCCAGCTGTAAAACTACCATAGAAGCTATCCATGGATTGATGTCTCAGGTTATTAAGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTCCTAAAATCATTTTTAAAAATTATTCTAAGTAATGAACAAAAAAGAATGGAAGATTT
TAATGTAATATTGGAATCAGTCTATAATTCTCAATTATAAAAAACTTCAGTAACCTGAAA
CAGAATTTTCCCTAACCTTCTGACAAGTAACAAAATTAACTTCTATGATTTATATCAAAT
TTTACATTGTCATTCTCTTGGAAAGGTGTTAGTAAGTAATGAAATGGTCAAAAAACATGC
AGGAGGCTAAAATTCACTATAGTAAACAATAAAGAATAAGCTGTAAATTGGTATGGTTTG
GTATATGTGAATAGAACCAAAAATCATTATTGTGGGTATAAGGATAGATGTGGGGGTGGG
GGAACTTGCATGTTTGAAACAGTTTTTAATTATCGTGACATTATGTGATGTATTTTTTCT
TTCCAGCTGTAAAACTACCATAGAAGCTATCCATGGATTGATGTCTCAGGTTATTAAGGA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               6-480, gnl|bosTau2|chr14 (18085279-18085778)
               

               
               6-480, gnl|Hg17|chr8 (68118468-68118053)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-480, gnl|bosTau2|chr14 (18085279-18085778)
               

               
               6-480, gnl|Hg17|chr8 (68118468-68118053)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fat (0.147427)
               

               
               csk (0.140746)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)
               

               
               csk (0.140746)

	6-480, gnl\|bosTau2\|chr14 (18085279-18085778)
	6-480, gnl\|Hg17\|chr8 (68118468-68118053)