Non-Coding RNA Search

Ss1.1-rfat0115_h19.5

Sequence:


               
               AGTATATTGAAGAATGCTAGATAACATGTTTAAAGGGAAGAAGATATATTTTTCTCTGTA
GATATTCTAACGACATTTGTTGCCTTCTTTGACATGTAATGGGAATTCCATTGGTTTGTC
TTAGAGATAAAGATGACTAACACCTATACAGTGTTTTGAAAAAAAGAGTAATGCTTAAGA
GGGAGGTTCTCAGTATTTTGCCCCACTGAAATACCCAAATAATGCTCATTATTAACTTGA
TTACAGACTGGTACAATTGGTGATGAGAAGGCAGAAATGTTCAGAAACCAAGTGACTGGA
AAAATTAACCTCCTTGGCCTGGTAGAAATCATCTTACTGAGTGTTGGTGTGGGGATGTTT
ATTGTTTTTATGATTTCATACTGTGCATGCAGATCAAAGAGAGTAAATTAAGAAGCAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTATATTGAAGAATGCTAGATAACATGTTTAAAGGGAAGAAGATATATTTTTCTCTGTA
GATATTCTAACGACATTTGTTGCCTTCTTTGACATGTAATGGGAATTCCATTGGTTTGTC
TTAGAGATAAAGATGACTAACACCTATACAGTGTTTTGAAAAAAAGAGTAATGCTTAAGA
GGGAGGTTCTCAGTATTTTGCCCCACTGAAATACCCAAATAATGCTCATTATTAACTTGA
TTACAGACTGGTACAATTGGTGATGAGAAGGCAGAAATGTTCAGAAACCAAGTGACTGGA
AAAATTAACCTCCTTGGCCTGGTAGAAATCATCTTACTGAGTGTTGGTGTGGGGATGTTT
ATTGTTTTTATGATTTCATACTGTGCATGCAGATCAAAGAGAGTAAATTAAGAAGCAAAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|12620274|gb|AAG60639.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|12620274|gb|AAG60639.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-420, gnl|bosTau2|chr4 (14718499-14718927)
               

               
               1-420, gnl|Hg17|chr7 (79947751-79948124)
               

               
               1-420, gnl|Mm7|chr5 (16800666-16799231)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-420, gnl|bosTau2|chr4 (14718499-14718927)
               

               
               1-420, gnl|Hg17|chr7 (79947751-79948124)
               

               
               1-420, gnl|Mm7|chr5 (16800666-16799231)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fat (0.147427)
               

               
               ldo (0.0970026)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)
               

               
               ldo (0.0970026)

	1-420, gnl\|bosTau2\|chr4 (14718499-14718927)
	1-420, gnl\|Hg17\|chr7 (79947751-79948124)
	1-420, gnl\|Mm7\|chr5 (16800666-16799231)