Ss1.1-rfat0116_n4.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAAATAAACTAAGATTTCCCTCTGGTCTACCATCTCCAACCGGAACATTTTCTATGCTG AAGGTTTTAGTGCTTAACCGGACAGGAGTAACATGGGCAGAGGTGCTCCGCTGTGCCTCT GGGTGGCCAGTCCTTGAGAAACTGTACCTTGAGTCTAACAATATCATCATTTCAGAAAGG CCAGCTGACGTTCTACAGACGGTCAAGTTACTAGACCTTTCCTCTAATCAGTTGATTGAT GAAAACCAGCTGTTTCTAATAGCTTATCTGCCCAGATTAGAACAACTAATCCTTTCTGAC ATTGGAATTTCCTCTCTACATTTTCCGGATGCTGGAATTGGGTGCAAAACAGCCATGTTT CCTTCCCTACAGTACCTTGTGCTCAATGACAATCAGATATCACAATGGTCCTTTATCAAT GAGCTGGATAAGTTACAGAGTCTGCACGCTCTGTCCTGTGCCAGAAACCCGCTGACTGAA GAAGGCAGCAAAGACGCGCAGACCACTCGTCAGTTCATCATCGCCAAGATCGGCCAGCTG CGGACCCTCAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAAATAAACTAAGATTTCCCTCTGGTCTACCATCTCCAACCGGAACATTTTCTATGCTG AAGGTTTTAGTGCTTAACCGGACAGGAGTAACATGGGCAGAGGTGCTCCGCTGTGCCTCT GGGTGGCCAGTCCTTGAGAAACTGTACCTTGAGTCTAACAATATCATCATTTCAGAAAGG CCAGCTGACGTTCTACAGACGGTCAAGTTACTAGACCTTTCCTCTAATCAGTTGATTGAT GAAAACCAGCTGTTTCTAATAGCTTATCTGCCCAGATTAGAACAACTAATCCTTTCTGAC ATTGGAATTTCCTCTCTACATTTTCCGGATGCTGGAATTGGGTGCAAAACAGCCATGTTT CCTTCCCTACAGTACCTTGTGCTCAATGACAATCAGATATCACAATGGTCCTTTATCAAT GAGCTGGATAAGTTACAGAGTCTGCACGCTCTGTCCTGTGCCAGAAACCCGCTGACTGAA GAAGGCAGCAAAGACGCGCAGACCACTCGTCAGTTCATCATCGCCAAGATCGGCCAGCTG CGGACCCTCAAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 1-104, gnl|bosTau2|chr28 (2977927-2977824) | |
| 1-104, gnl|canFam2|chr4 (7499960-7499735) | |
| 1-104, gnl|dasNov1|scaffold_25103 (780-554) | |
| 1-104, gnl|echTel1|scaffold_282010 (126032-126275) | |
| 1-104, gnl|galGal2|chrUn (118937584-118937381) | |
| 1-104, gnl|hg17|chr1 (231919956-231920183) | |
| 1-104, gnl|Hg17|chr1 (231920062-231920162) | |
| 1-104, gnl|mm7|chr13 (13375542-13375366) | |
| 1-104, gnl|Mm7|chr13 (13375484-13375381) | |
| 1-104, gnl|monDom2|scaffold_13 (50274105-50273901) | |
| 1-104, gnl|oryCun1|scaffold_178454 (9988-10219) | |
| 1-104, gnl|panTro1|chr1 (215751728-215751955) | |
| 1-104, gnl|rheMac2|chr1 (221580833-221580606) | |
| 1-104, gnl|rn3|chr17 (59532826-59533033) | |
| 131-275, gnl|bosTau2|chr28 (2975080-2974938) | |
| 131-275, gnl|Hg17|chr1 (231925044-231925196) | |
| 131-275, gnl|Mm7|chr13 (13372143-13371992) | |
| 403-552, gnl|bosTau2|chr28 (2973868-2973722) | |
| 403-552, gnl|canFam2|chr4 (7494707-7494500) | |
| 403-552, gnl|dasNov1|scaffold_2442 (69166-69373) | |
| 403-552, gnl|galGal2|chrUn (142890036-142890251) | |
| 403-552, gnl|hg17|chr1 (231926645-231926852) | |
| 403-552, gnl|Hg17|chr1 (231926675-231926821) | |
| 403-552, gnl|loxAfr1|scaffold_46753 (35204-35400) | |
| 403-552, gnl|mm7|chr13 (13370860-13370682) | |
| 403-552, gnl|Mm7|chr13 (13370836-13370702) | |
| 403-552, gnl|monDom2|scaffold_13 (50240085-50239890) | |
| 403-552, gnl|oryCun1|scaffold_178454 (15484-15695) | |
| 403-552, gnl|panTro1|chr1 (215758413-215758620) | |
| 403-552, gnl|rheMac2|chr1 (221574459-221574252) | |
| 403-552, gnl|rn3|chr17 (59537002-59537192) | |
| 403-552, gnl|tetNig1|chrUn_random (161840139-161839964) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-104, gnl|bosTau2|chr28 (2977927-2977824) | |
| 1-104, gnl|canFam2|chr4 (7499960-7499735) | |
| 1-104, gnl|dasNov1|scaffold_25103 (780-554) | |
| 1-104, gnl|echTel1|scaffold_282010 (126032-126275) | |
| 1-104, gnl|galGal2|chrUn (118937584-118937381) | |
| 1-104, gnl|hg17|chr1 (231919956-231920183) | |
| 1-104, gnl|Hg17|chr1 (231920062-231920162) | |
| 1-104, gnl|mm7|chr13 (13375542-13375366) | |
| 1-104, gnl|Mm7|chr13 (13375484-13375381) | |
| 1-104, gnl|monDom2|scaffold_13 (50274105-50273901) | |
| 1-104, gnl|oryCun1|scaffold_178454 (9988-10219) | |
| 1-104, gnl|panTro1|chr1 (215751728-215751955) | |
| 1-104, gnl|rheMac2|chr1 (221580833-221580606) | |
| 1-104, gnl|rn3|chr17 (59532826-59533033) | |
| 131-275, gnl|bosTau2|chr28 (2975080-2974938) | |
| 131-275, gnl|Hg17|chr1 (231925044-231925196) | |
| 131-275, gnl|Mm7|chr13 (13372143-13371992) | |
| 403-552, gnl|bosTau2|chr28 (2973868-2973722) | |
| 403-552, gnl|canFam2|chr4 (7494707-7494500) | |
| 403-552, gnl|dasNov1|scaffold_2442 (69166-69373) | |
| 403-552, gnl|galGal2|chrUn (142890036-142890251) | |
| 403-552, gnl|hg17|chr1 (231926645-231926852) | |
| 403-552, gnl|Hg17|chr1 (231926675-231926821) | |
| 403-552, gnl|loxAfr1|scaffold_46753 (35204-35400) | |
| 403-552, gnl|mm7|chr13 (13370860-13370682) | |
| 403-552, gnl|Mm7|chr13 (13370836-13370702) | |
| 403-552, gnl|monDom2|scaffold_13 (50240085-50239890) | |
| 403-552, gnl|oryCun1|scaffold_178454 (15484-15695) | |
| 403-552, gnl|panTro1|chr1 (215758413-215758620) | |
| 403-552, gnl|rheMac2|chr1 (221574459-221574252) | |
| 403-552, gnl|rn3|chr17 (59537002-59537192) | |
| 403-552, gnl|tetNig1|chrUn_random (161840139-161839964) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| ece (0.229305) | |
| fat (0.147427) | |
| ste (0.135208) | |
| cty (0.10408) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) | |
| fat (0.147427) | |
| ste (0.135208) | |
| cty (0.10408) |