Ss1.1-rfat0118_k20.5
|
GCCCGCCCCCCAGTCCTGTGCATCCAGGTCCATACTCAGTGCTGACTGAGAGCTTGCAGC
CCAGCCCCACTCTGGACACCACTGGTGTGTGGAATGCTCTGGAACGCGGTGGGGTTGGGG
TTGGGGATATAGGGCACGGCAGACCCAGTCACAGAGCAGCGCAGATAAGAATGACTCGTC
CGCTTGCTTCGGGCTCCTGTTTCAGTTCCCTCTACAGCAAGGAGAGGGCACGCTTATCCT
CTAGGTGTTTCTTTAAGCACTTTCTAATTAAATTGTCTAATATCCAAAGAGTATCTCCTT
GGAAAGAAGAGATTCAGTGTAATTATGCCCAGGCTTTAAATCGCATCTTAACAAAAGCAC
AGTTAATTATTTTATCCTTTTAATTTAAATGACAGGTTTCTGAGGAAATGGAGAAAATGT
TATCTCGAGAAAGGGCTTTACAAATTAAAATATTAGAGCTGGAAACGGAGCTTAGAAAGA
AAATTGAAGAACAAAATCAACTCGTTTGCAAAATGAGCAGTAAAGCACAACATCAGGAAC
TCTGTTTGAAGGAAATACAGCATAGTCTTGAGAAGTCAGAGAATCAAAATGAGAGTATTA
AGAGTTATTTACAGTTTCTTAAAACTTCTTATGTAACAATGTTTGGATAAATTGTTGGGT
TTATTTTCTATAAGCAGTGGGATTTTTTTTTACTGGTAGCCTAATAAAGAATTAGGTAAA
AATTAAATAAATATACTCTATTGTTATACTTCATGATTTATGGGTGGTAGTATTAGAGTT
TAAAGACTTTTTAAACATAATTTATTGTCCAATTGAAACTTTTAAACAAGATACATGTTA
GTATTCCTTTCTTGCTGAATAATTTTCACTTATCTCTGGGTTAATGTCTATTTAATTTAT
TTTGGTTTTTAGGATATTTTATACACAGAGAAGCAGCCAGAATCATTTTTTGTGACTGTA
GCCACCATTCAAGTGAATTTGTAATAAACCCAGGCCAATTATGAGCAAGTACATGATTTT
AAGTAATTCTATAGTTATTTTGTATTAGGGTCCTATATATGTACATATTACTATAATAAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
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GCCCGCCCCCCAGTCCTGTGCATCCAGGTCCATACTCAGTGCTGACTGAGAGCTTGCAGC
CCAGCCCCACTCTGGACACCACTGGTGTGTGGAATGCTCTGGAACGCGGTGGGGTTGGGG
TTGGGGATATAGGGCACGGCAGACCCAGTCACAGAGCAGCGCAGATAAGAATGACTCGTC
CGCTTGCTTCGGGCTCCTGTTTCAGTTCCCTCTACAGCAAGGAGAGGGCACGCTTATCCT
CTAGGTGTTTCTTTAAGCACTTTCTAATTAAATTGTCTAATATCCAAAGAGTATCTCCTT
GGAAAGAAGAGATTCAGTGTAATTATGCCCAGGCTTTAAATCGCATCTTAACAAAAGCAC
AGTTAATTATTTTATCCTTTTAATTTAAATGACAGGTTTCTGAGGAAATGGAGAAAATGT
TATCTCGAGAAAGGGCTTTACAAATTAAAATATTAGAGCTGGAAACGGAGCTTAGAAAGA
AAATTGAAGAACAAAATCAACTCGTTTGCAAAATGAGCAGTAAAGCACAACATCAGGAAC
TCTGTTTGAAGGAAATACAGCATAGTCTTGAGAAGTCAGAGAATCAAAATGAGAGTATTA
AGAGTTATTTACAGTTTCTTAAAACTTCTTATGTAACAATGTTTGGATAAATTGTTGGGT
TTATTTTCTATAAGCAGTGGGATTTTTTTTTACTGGTAGCCTAATAAAGAATTAGGTAAA
AATTAAATAAATATACTCTATTGTTATACTTCATGATTTATGGGTGGTAGTATTAGAGTT
TAAAGACTTTTTAAACATAATTTATTGTCCAATTGAAACTTTTAAACAAGATACATGTTA
GTATTCCTTTCTTGCTGAATAATTTTCACTTATCTCTGGGTTAATGTCTATTTAATTTAT
TTTGGTTTTTAGGATATTTTATACACAGAGAAGCAGCCAGAATCATTTTTTGTGACTGTA
GCCACCATTCAAGTGAATTTGTAATAAACCCAGGCCAATTATGAGCAAGTACATGATTTT
AAGTAATTCTATAGTTATTTTGTATTAGGGTCCTATATATGTACATATTACTATAATAAA |
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gi|60360200|dbj|BAD90345.1| |
Protein identifier
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gi|60360200|dbj|BAD90345.1| |
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253-520, gnl|bosTau2|chr3 (42174496-42174229) |
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253-520, gnl|canFam2|chr6 (64813360-64813182) |
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253-520, gnl|dasNov1|scaffold_14898 (44217-44395) |
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253-520, gnl|echTel1|scaffold_310479 (18502-18324) |
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253-520, gnl|galGal2|chr8 (16345040-16344871) |
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253-520, gnl|hg17|chr1 (86530557-86530730) |
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253-520, gnl|Hg17|chr1 (86530810-86530564) |
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253-520, gnl|loxAfr1|scaffold_18134 (5799-5623) |
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253-520, gnl|mm7|chr3 (145045724-145045546) |
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253-520, gnl|Mm7|chr3 (145045450-145045715) |
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253-520, gnl|monDom2|scaffold_16 (419879-419699) |
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253-520, gnl|oryCun1|scaffold_189990 (33225-33403) |
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253-520, gnl|panTro1|chr1 (85193550-85193723) |
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253-520, gnl|rn3|chr2 (243176969-243176791) |
| |
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522-1080, gnl|bosTau2|chr3 (42172260-42171698) |
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522-1080, gnl|Hg17|chr1 (86526582-86526053) |
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522-1080, gnl|Mm7|chr3 (145048015-145048499) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
253-520, gnl|bosTau2|chr3 (42174496-42174229) |
|
253-520, gnl|canFam2|chr6 (64813360-64813182) |
|
253-520, gnl|dasNov1|scaffold_14898 (44217-44395) |
|
253-520, gnl|echTel1|scaffold_310479 (18502-18324) |
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253-520, gnl|galGal2|chr8 (16345040-16344871) |
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253-520, gnl|hg17|chr1 (86530557-86530730) |
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253-520, gnl|Hg17|chr1 (86530810-86530564) |
|
253-520, gnl|loxAfr1|scaffold_18134 (5799-5623) |
|
253-520, gnl|mm7|chr3 (145045724-145045546) |
|
253-520, gnl|Mm7|chr3 (145045450-145045715) |
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253-520, gnl|monDom2|scaffold_16 (419879-419699) |
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253-520, gnl|oryCun1|scaffold_189990 (33225-33403) |
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253-520, gnl|panTro1|chr1 (85193550-85193723) |
|
253-520, gnl|rn3|chr2 (243176969-243176791) |
| |
|
522-1080, gnl|bosTau2|chr3 (42172260-42171698) |
|
522-1080, gnl|Hg17|chr1 (86526582-86526053) |
|
522-1080, gnl|Mm7|chr3 (145048015-145048499) |
|
tra (0.492368) |
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vin (0.332557) |
|
cki (0.330469) |
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fat (0.294855) |
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spl (0.143184) |
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che (0.136314) |
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tra (0.492368) |
|
vin (0.332557) |
|
cki (0.330469) |
|
fat (0.294855) |
|
spl (0.143184) |
|
che (0.136314) |
