Ss1.1-rfat0137_i22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTCAGATTAAGGGCAGTTACTTTAAATCCATTTTAAACACTGAGGTTAGAAATTAAAGCA CTTAACTAGCCACATGATTTGGTATAACATTTTCTCTTTATAATTTGAATTTGGGCTTAT TTAATACACTGATAAATTATTTCAAAGATATTTTTATAACTCAAATTGCTTCACTTTTAC ACTGATAAATATAGCTTATTAAGAATGACATTCAAGTAGAGCTTAGCATCCATAATCAAT TTGAAAATAATATATTCATCAGGTACCTATGGAGTAAATCACATAATGGCATATTTAAGC TGAGCCTCTGTCTGGAAAGTACATTTACTGTATTTACAGAAATACCTCTCTTTATTTAGG TATTTTGTCAGATATTTCAGAGGAAGCTAAAAGGAAATGGTATGACATATAATAATAATA ATCTGTCCTTCTTAAAAGAGCATGCAGTCCTTTGCAGTACCTCATATTCAGCCACGTATT TGCTCTTTTCCTCATTCAGTATGAGGCAGCTTTCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTCAGATTAAGGGCAGTTACTTTAAATCCATTTTAAACACTGAGGTTAGAAATTAAAGCA CTTAACTAGCCACATGATTTGGTATAACATTTTCTCTTTATAATTTGAATTTGGGCTTAT TTAATACACTGATAAATTATTTCAAAGATATTTTTATAACTCAAATTGCTTCACTTTTAC ACTGATAAATATAGCTTATTAAGAATGACATTCAAGTAGAGCTTAGCATCCATAATCAAT TTGAAAATAATATATTCATCAGGTACCTATGGAGTAAATCACATAATGGCATATTTAAGC TGAGCCTCTGTCTGGAAAGTACATTTACTGTATTTACAGAAATACCTCTCTTTATTTAGG TATTTTGTCAGATATTTCAGAGGAAGCTAAAAGGAAATGGTATGACATATAATAATAATA ATCTGTCCTTCTTAAAAGAGCATGCAGTCCTTTGCAGTACCTCATATTCAGCCACGTATT TGCTCTTTTCCTCATTCAGTATGAGGCAGCTTTCAG |
| Aligned organism(s): 53 entry(ies) | More info |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
| 1-512, gnl|bosTau2|chr11 (56234978-56235487) | |
| 1-512, gnl|canFam2|chr17 (21644659-21645370) | |
| 1-512, gnl|canFam2|chr17 (21644606-21645370) | |
| 1-512, gnl|canFam2|chr17 (21645352-21644545) | |
| 1-512, gnl|canFam2|chr17 (21645352-21645008) | |
| 1-512, gnl|canFam2|chr17 (21644606-21645370) | |
| 1-512, gnl|dasNov1|scaffold_75481 (7546-8250) | |
| 1-512, gnl|dasNov1|scaffold_75481 (7492-8250) | |
| 1-512, gnl|dasNov1|scaffold_75481 (8232-7434) | |
| 1-512, gnl|dasNov1|scaffold_75481 (8232-7894) | |
| 1-512, gnl|dasNov1|scaffold_75481 (7492-8250) | |
| 1-512, gnl|echTel1|scaffold_310207 (89986-89290) | |
| 1-512, gnl|echTel1|scaffold_310207 (90043-89291) | |
| 1-512, gnl|echTel1|scaffold_310207 (89304-90104) | |
| 1-512, gnl|echTel1|scaffold_310207 (89304-89650) | |
| 1-512, gnl|echTel1|scaffold_310207 (90043-89290) | |
| 1-512, gnl|hg17|chr10 (30690364-30691118) | |
| 1-512, gnl|hg17|chr15_random (600160-600959) | |
| 1-512, gnl|hg17|chr15_random (641232-641578) | |
| 1-512, gnl|hg17|chr15_random (27034-27789) | |
| 1-512, gnl|hg17|chr2 (24373852-24374562) | |
| 1-512, gnl|Hg17|chr2 (24374733-24374226) | |
| 1-512, gnl|loxAfr1|scaffold_144698 (3766-3057) | |
| 1-512, gnl|loxAfr1|scaffold_144698 (3821-3057) | |
| 1-512, gnl|loxAfr1|scaffold_144698 (3075-3882) | |
| 1-512, gnl|loxAfr1|scaffold_144698 (3075-3417) | |
| 1-512, gnl|loxAfr1|scaffold_144698 (3821-3057) | |
| 1-512, gnl|mm7|chr12 (4611508-4610900) | |
| 1-512, gnl|mm7|chr12 (4611567-4610900) | |
| 1-512, gnl|mm7|chr12 (4610900-4611627) | |
| 1-512, gnl|mm7|chr12 (4610900-4611220) | |
| 1-512, gnl|mm7|chr12 (4611567-4610900) | |
| 1-512, gnl|Mm7|chr12 (4610554-4611211) | |
| 1-512, gnl|oryCun1|scaffold_200093 (89588-90269) | |
| 1-512, gnl|oryCun1|scaffold_200093 (89531-90269) | |
| 1-512, gnl|oryCun1|scaffold_200093 (90251-89470) | |
| 1-512, gnl|oryCun1|scaffold_200093 (90251-89929) | |
| 1-512, gnl|oryCun1|scaffold_200093 (89531-90269) | |
| 1-512, gnl|panTro1|chr12 (25252357-25253061) | |
| 1-512, gnl|panTro1|chr16 (84423678-84424476) | |
| 1-512, gnl|panTro1|chr16 (76645558-76645239) | |
| 1-512, gnl|panTro1|chr8 (31065920-31066679) | |
| 1-512, gnl|panTro1|chrUn_random (7409307-7410059) | |
| 1-512, gnl|rheMac2|chr13 (24155541-24156279) | |
| 1-512, gnl|rheMac2|chr7 (61491965-61491153) | |
| 1-512, gnl|rheMac2|chr7 (61491965-61491628) | |
| 1-512, gnl|rheMac2|chr7 (54760760-54759984) | |
| 1-512, gnl|rheMac2|chr9 (30489188-30489952) | |
| 1-512, gnl|rn3|chrUn (42875097-42875714) | |
| 1-512, gnl|rn3|chrUn (42875045-42875714) | |
| 1-512, gnl|rn3|chrUn (42875702-42874985) | |
| 1-512, gnl|rn3|chrUn (42875702-42875379) | |
| 1-512, gnl|rn3|chrUn (42875045-42875714) |
| Aligned organism(s): 53 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-512, gnl|bosTau2|chr11 (56234978-56235487) | |
| 1-512, gnl|canFam2|chr17 (21644659-21645370) | |
| 1-512, gnl|canFam2|chr17 (21644606-21645370) | |
| 1-512, gnl|canFam2|chr17 (21645352-21644545) | |
| 1-512, gnl|canFam2|chr17 (21645352-21645008) | |
| 1-512, gnl|canFam2|chr17 (21644606-21645370) | |
| 1-512, gnl|dasNov1|scaffold_75481 (7546-8250) | |
| 1-512, gnl|dasNov1|scaffold_75481 (7492-8250) | |
| 1-512, gnl|dasNov1|scaffold_75481 (8232-7434) | |
| 1-512, gnl|dasNov1|scaffold_75481 (8232-7894) | |
| 1-512, gnl|dasNov1|scaffold_75481 (7492-8250) | |
| 1-512, gnl|echTel1|scaffold_310207 (89986-89290) | |
| 1-512, gnl|echTel1|scaffold_310207 (90043-89291) | |
| 1-512, gnl|echTel1|scaffold_310207 (89304-90104) | |
| 1-512, gnl|echTel1|scaffold_310207 (89304-89650) | |
| 1-512, gnl|echTel1|scaffold_310207 (90043-89290) | |
| 1-512, gnl|hg17|chr10 (30690364-30691118) | |
| 1-512, gnl|hg17|chr15_random (600160-600959) | |
| 1-512, gnl|hg17|chr15_random (641232-641578) | |
| 1-512, gnl|hg17|chr15_random (27034-27789) | |
| 1-512, gnl|hg17|chr2 (24373852-24374562) | |
| 1-512, gnl|Hg17|chr2 (24374733-24374226) | |
| 1-512, gnl|loxAfr1|scaffold_144698 (3766-3057) | |
| 1-512, gnl|loxAfr1|scaffold_144698 (3821-3057) | |
| 1-512, gnl|loxAfr1|scaffold_144698 (3075-3882) | |
| 1-512, gnl|loxAfr1|scaffold_144698 (3075-3417) | |
| 1-512, gnl|loxAfr1|scaffold_144698 (3821-3057) | |
| 1-512, gnl|mm7|chr12 (4611508-4610900) | |
| 1-512, gnl|mm7|chr12 (4611567-4610900) | |
| 1-512, gnl|mm7|chr12 (4610900-4611627) | |
| 1-512, gnl|mm7|chr12 (4610900-4611220) | |
| 1-512, gnl|mm7|chr12 (4611567-4610900) | |
| 1-512, gnl|Mm7|chr12 (4610554-4611211) | |
| 1-512, gnl|oryCun1|scaffold_200093 (89588-90269) | |
| 1-512, gnl|oryCun1|scaffold_200093 (89531-90269) | |
| 1-512, gnl|oryCun1|scaffold_200093 (90251-89470) | |
| 1-512, gnl|oryCun1|scaffold_200093 (90251-89929) | |
| 1-512, gnl|oryCun1|scaffold_200093 (89531-90269) | |
| 1-512, gnl|panTro1|chr12 (25252357-25253061) | |
| 1-512, gnl|panTro1|chr16 (84423678-84424476) | |
| 1-512, gnl|panTro1|chr16 (76645558-76645239) | |
| 1-512, gnl|panTro1|chr8 (31065920-31066679) | |
| 1-512, gnl|panTro1|chrUn_random (7409307-7410059) | |
| 1-512, gnl|rheMac2|chr13 (24155541-24156279) | |
| 1-512, gnl|rheMac2|chr7 (61491965-61491153) | |
| 1-512, gnl|rheMac2|chr7 (61491965-61491628) | |
| 1-512, gnl|rheMac2|chr7 (54760760-54759984) | |
| 1-512, gnl|rheMac2|chr9 (30489188-30489952) | |
| 1-512, gnl|rn3|chrUn (42875097-42875714) | |
| 1-512, gnl|rn3|chrUn (42875045-42875714) | |
| 1-512, gnl|rn3|chrUn (42875702-42874985) | |
| 1-512, gnl|rn3|chrUn (42875702-42875379) | |
| 1-512, gnl|rn3|chrUn (42875045-42875714) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fat (0.147427) | |
| bla (0.124347) |