Non-Coding RNA Search

Ss1.1-rfat0140_c20.5

Sequence:


               
               ACAGCTCTTGTATGTATTTTAGATGCTAGGAAGTTTTTAGCATGTGATGTGTGATTCTTG
TTTGAATGTTTATTACAGGTACCTTGTGAATTCCAGAACAGAGACTGTGCCTCACAATTG
TTGGTCCCATGAACTTGCACTATCTTTCGTGGTAATGTTTTGAAAATACAATCAGGAAAA
AAAAAGTTTGGAACTTAAAAATTAATCGTATATCATGAAATTAAAAAGAATCTCTTCTTC
CCGTTTCCTTACTCCTACGAAATAGCTACATTTAAGTCAAACGCAGGAGGTAGGGAAAAA
AATCCTGGCCAGAGGATAGGTTAGTGGAGTAAATTGATTACAGTTAAAAAAAAAAATGCT
TCACCATAGATATTTTCCTGTTTCTCTTTTTTACCTTTTTAAAAATATTACTTTTTAGGG
ACATTTGGTATAATATGCATAAAATTATTTACTGACTTATGGGCAAAATGATACAAGTAG
CATCTTGATTGAACATCATTTACCTCAGATATTCAACCAGCAGTACATTTTTTATGCAGT
CTCAACCATATCCTATTTGTTACCTCTCTCAAAATATGGGTAAGTAATTATTTTAGCTTT
ACTCTGTATTTCTTGTCAGTGTTTGGGGCACAGGTTGTTGTACTACTGTCAAGTTGTACT
TGCTATTTTTTCTGCAAGTATTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAGCTCTTGTATGTATTTTAGATGCTAGGAAGTTTTTAGCATGTGATGTGTGATTCTTG
TTTGAATGTTTATTACAGGTACCTTGTGAATTCCAGAACAGAGACTGTGCCTCACAATTG
TTGGTCCCATGAACTTGCACTATCTTTCGTGGTAATGTTTTGAAAATACAATCAGGAAAA
AAAAAGTTTGGAACTTAAAAATTAATCGTATATCATGAAATTAAAAAGAATCTCTTCTTC
CCGTTTCCTTACTCCTACGAAATAGCTACATTTAAGTCAAACGCAGGAGGTAGGGAAAAA
AATCCTGGCCAGAGGATAGGTTAGTGGAGTAAATTGATTACAGTTAAAAAAAAAAATGCT
TCACCATAGATATTTTCCTGTTTCTCTTTTTTACCTTTTTAAAAATATTACTTTTTAGGG
ACATTTGGTATAATATGCATAAAATTATTTACTGACTTATGGGCAAAATGATACAAGTAG
CATCTTGATTGAACATCATTTACCTCAGATATTCAACCAGCAGTACATTTTTTATGCAGT
CTCAACCATATCCTATTTGTTACCTCTCTCAAAATATGGGTAAGTAATTATTTTAGCTTT
ACTCTGTATTTCTTGTCAGTGTTTGGGGCACAGGTTGTTGTACTACTGTCAAGTTGTACT
TGCTATTTTTTCTGCAAGTATTTA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-575, gnl|bosTau2|chr2 (31792453-31791879)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-575, gnl|bosTau2|chr2 (31792453-31791879)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

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               rec (0.17307)
               

               
               fat (0.147427)
               

               
               lyg (0.133103)
               

               
               tra (0.123092)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               rec (0.17307)
               

               
               fat (0.147427)
               

               
               lyg (0.133103)
               

               
               tra (0.123092)