Non-Coding RNA Search

Ss1.1-rfbs3906b_g13.5

Sequence:


               
               TCTCAGATGTCCAGGGGCCAGCTGCTGTGCCTCTGCTTCAGGAGCCACGCCTCACAGACC
TGCAGGTTCAGAAACTGACACCTTTGTGGGAGCAGAAGAACCTCGCCAACAGCCACGTGT
CAGCCGCTGCCCCTTTGCCTGAGCAGGGAAGCCTTCGGGATGTTCAGGGCCCGTTCCCCA
GCCCAGTTCAGACCACCGTGGTTTGCTGCAAACCAGGAGGCCACTCAATCCCTCGTGTTG
CCAGTTCAGAGTCTTCAGACTTGACCCCACCCCACATCACGGGCCCCTTCACCACCGGCC
CAGCCCCAGCCCCCACCGGCCCCAGCCAGGAGGCTCAGCTACGCCACCACGGTCAACATC
CACGTTGGGGGTGGCGGGCGGCTACTGCCAGCCAAGGGCCAGGTCAGGTTGAATCACCCT
GCTCTCTTGGCACCCCCCCAGGAATCTGTGGGCCTTCGCAGAGCCCAGGGTGGCTCCAGA
TGCCCCTTTCCACATGTGACCCAGGATGTTGGGCTTCTTGAAAAGCAAAGACTTCAGCCA
CATACCACAGAGCCTCAGAATTCACAGAGGTCCAGACACTGAATGCAGGTCCAAAAATTG
CTACTGTTTCCCAATGCCTGGGATCTTTGGTGATTGGTCCTTATTACTTACCTGGATTTA
CCCAGCAGGGGTGGGCAAGGGGAGTGTCATTAATATTTTGTTAATTAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTCAGATGTCCAGGGGCCAGCTGCTGTGCCTCTGCTTCAGGAGCCACGCCTCACAGACC
TGCAGGTTCAGAAACTGACACCTTTGTGGGAGCAGAAGAACCTCGCCAACAGCCACGTGT
CAGCCGCTGCCCCTTTGCCTGAGCAGGGAAGCCTTCGGGATGTTCAGGGCCCGTTCCCCA
GCCCAGTTCAGACCACCGTGGTTTGCTGCAAACCAGGAGGCCACTCAATCCCTCGTGTTG
CCAGTTCAGAGTCTTCAGACTTGACCCCACCCCACATCACGGGCCCCTTCACCACCGGCC
CAGCCCCAGCCCCCACCGGCCCCAGCCAGGAGGCTCAGCTACGCCACCACGGTCAACATC
CACGTTGGGGGTGGCGGGCGGCTACTGCCAGCCAAGGGCCAGGTCAGGTTGAATCACCCT
GCTCTCTTGGCACCCCCCCAGGAATCTGTGGGCCTTCGCAGAGCCCAGGGTGGCTCCAGA
TGCCCCTTTCCACATGTGACCCAGGATGTTGGGCTTCTTGAAAAGCAAAGACTTCAGCCA
CATACCACAGAGCCTCAGAATTCACAGAGGTCCAGACACTGAATGCAGGTCCAAAAATTG
CTACTGTTTCCCAATGCCTGGGATCTTTGGTGATTGGTCCTTATTACTTACCTGGATTTA
CCCAGCAGGGGTGGGCAAGGGGAGTGTCATTAATATTTTGTTAATTAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               11-276, gnl|bosTau2|chr18 (43737283-43737018)
               

               
               11-276, gnl|Hg17|chr19 (44607129-44607394)
               

               
               11-276, gnl|Mm7|chr7 (25294318-25294071)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-276, gnl|bosTau2|chr18 (43737283-43737018)
               

               
               11-276, gnl|Hg17|chr19 (44607129-44607394)
               

               
               11-276, gnl|Mm7|chr7 (25294318-25294071)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fbs (0.175346)
               

               
               med (0.116252)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               med (0.116252)
               

               
               eje (0.0988338)

	11-276, gnl\|bosTau2\|chr18 (43737283-43737018)
	11-276, gnl\|Hg17\|chr19 (44607129-44607394)
	11-276, gnl\|Mm7\|chr7 (25294318-25294071)