Non-Coding RNA Search

Ss1.1-rfbs3913b_i20.5

Sequence:


               
               CGGGGGGCAGGCCAGCACCTCCCAGTCGCCTCCCGGAGAGACCCAGGTTTGCTCCAGGAA
CTCCAGGCAAAGGAGCCATGGGCGGCCCCTCGGCGTAAGGACCGGGGTGCTTCTGACAGC
CCTCGCTGACACTCACCTTGGTGACGACAGTGACACTAGTGATCTCACAGAGGACACGAA
CCTTCTCTGTCAACTAAATGAATAGCTATTTTCTTGTCATTTTTTTAAGCGCAACTATGC
TTCATGCTGCTTCAGTTATGGGATGAATGCTGAGAAATACGTAATCACAGACGTTTTAAT
ACCATTTCATTGCTGTTTCACGAATGATCATTATTTCACAAGAATTATCTTTTGCTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGGGGCAGGCCAGCACCTCCCAGTCGCCTCCCGGAGAGACCCAGGTTTGCTCCAGGAA
CTCCAGGCAAAGGAGCCATGGGCGGCCCCTCGGCGTAAGGACCGGGGTGCTTCTGACAGC
CCTCGCTGACACTCACCTTGGTGACGACAGTGACACTAGTGATCTCACAGAGGACACGAA
CCTTCTCTGTCAACTAAATGAATAGCTATTTTCTTGTCATTTTTTTAAGCGCAACTATGC
TTCATGCTGCTTCAGTTATGGGATGAATGCTGAGAAATACGTAATCACAGACGTTTTAAT
ACCATTTCATTGCTGTTTCACGAATGATCATTATTTCACAAGAATTATCTTTTGCTTTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-360, gnl|bosTau2|chr13 (28278883-28278558)
               

               
               4-360, gnl|Hg17|chr20 (24594856-24595220)
               

               
               4-360, gnl|Mm7|chr2 (149744868-149745198)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-360, gnl|bosTau2|chr13 (28278883-28278558)
               

               
               4-360, gnl|Hg17|chr20 (24594856-24595220)
               

               
               4-360, gnl|Mm7|chr2 (149744868-149745198)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               cbe (0.239234)
               

               
               ece (0.229305)
               

               
               fbs (0.175346)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbe (0.239234)
               

               
               ece (0.229305)
               

               
               fbs (0.175346)

	4-360, gnl\|bosTau2\|chr13 (28278883-28278558)
	4-360, gnl\|Hg17\|chr20 (24594856-24595220)
	4-360, gnl\|Mm7\|chr2 (149744868-149745198)