Non-Coding RNA Search

Ss1.1-rfbs3918b_e17.5

Sequence:


               
               CTTACATATGCCATGGGTGGAGCCAAAAAACTAAAATATTTTTAAAAA------------
------------GATAAAGAAGATGTGGTACATATATACAGGAATACTACCCAGTCATAA
AAAAGAATGAAATAATGCAATTTGCAGCAACATGGATGGACCTAGAGATTATTATATTAA
GGGAAATAAGTCAGAATGAGAAAGACAAATACCATATGTTATCATTTATATGTGGAATCT
AAAATACAACAAATTAACTTATCTATGAAATAGAAATAGAATCACAGATGAATCCCAGCT
CTGTGTGGTTGTCAAGGAGGAGGATGAGTGGTGGAGGGAAGCAATGGGAGTTTGGGATTA
GTAGATGCAAACTATTCTATATAGAATGGATAAACAACAAGATCCTACTGTATAACACAG
GAAACTATATTCAATACCCTGTGAGAAACCATAATGGTAAAGAATATGAAAAAGAATGTA
AAAATAACTGAATCATTTTGTTGTACAGCAGAAATTAACACAACACTGTAAATCAACTAT
ACTTCAATAAAGGAAATTTAACATGAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTACATATGCCATGGGTGGAGCCAAAAAACTAAAATATTTTTAAAAA------------
------------GATAAAGAAGATGTGGTACATATATACAGGAATACTACCCAGTCATAA
AAAAGAATGAAATAATGCAATTTGCAGCAACATGGATGGACCTAGAGATTATTATATTAA
GGGAAATAAGTCAGAATGAGAAAGACAAATACCATATGTTATCATTTATATGTGGAATCT
AAAATACAACAAATTAACTTATCTATGAAATAGAAATAGAATCACAGATGAATCCCAGCT
CTGTGTGGTTGTCAAGGAGGAGGATGAGTGGTGGAGGGAAGCAATGGGAGTTTGGGATTA
GTAGATGCAAACTATTCTATATAGAATGGATAAACAACAAGATCCTACTGTATAACACAG
GAAACTATATTCAATACCCTGTGAGAAACCATAATGGTAAAGAATATGAAAAAGAATGTA
AAAATAACTGAATCATTTTGTTGTACAGCAGAAATTAACACAACACTGTAAATCAACTAT
ACTTCAATAAAGGAAATTTAACATGAAAAAAAAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               2-451, gnl|bosTau2|chr1 (45007141-45007589)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-451, gnl|bosTau2|chr1 (45007141-45007589)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               fbs (0.175346)
               

               
               bla (0.124347)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.175346)
               

               
               bla (0.124347)