Non-Coding RNA Search

Ss1.1-rfbs3925b_b2.5

Sequence:


               
               TCTCTCTGCCAGGTTACTACAGCTCTGGCCCTGGCCAGTCTCCCCAGCCAGCTCCCGCAC
ATTCTGGTCAGCGCCTGCCAGGCTGTCCTGTCCGCACCGCTCAGCGCCAGGCCCTCCTCC
CTCCCCATCCCGCCCTCTCACACAATGACTGCGGTTCATCGGCCTTGACTCTGGCAACTG
AAGAGGTCAACACCCACCTCACCCGCAGCCCTAGCCCCTGTTGGTCCCTCAAAGAGAATC
AGAAAAGAGCCCCAGAAGATGCTGGATGCCTACACTGAGAGGGCGGGTGGGCCATCCTTA
GTGTGGGGCTCAGCACACGGTGGGCGCCCAAGACGAGCAGCTGCCATCCCAGGCACCCTT
CCTGCCTGAATCCAGTCCATCCTGAAAAGAGTGGGAGCACGTAGTCCACTCTTCCAGCTC
CTAGGATCCCAGAATTTCAGAGCACGACAAAGGGTGTTTTCAGTACCTCTGACGGGGAGT
TCCCTGGTGGCGCAGTGGGTTAAGAATCTGGTGTTGTGGAGTTCCTGTTGTGACAAACCA
GACTAGGATCCATGAAGATGCAGGCCTCTCCAGCTCACCGCCGTGCTTCAGACACATGGG
GACGTGGGCGACGACGGCGACAGTGTACACCTGGTTCAGGGGGCACAGGTGCAGACATGC
CTACCAGGACGTAGCTGAGGCTCCCTGCAGCTCCTGCCCACCCTGCTGCCCAGCACACAT
GCCCTTTAACTGTCTTTGCTGGCACACACGTGACCTCACAGTAGCTGTTTATTTGGCATG
ACTCTCAGAGGTGGATCTGAGAAAATGTTGCTGTGGTTTATGTCAGAGAGGGTTTGGCCT
ATGTTTTCCTCTAAGAGTTTTATAGTGTCTGGTCTTATATCCAGGTTTTTAATCCAGTTT
GAGTTTATTTTTCTGTATGGTGTGAGGGAGTGTTCTAATTTCATTCTTTCCCATGTGGGT
GTCCAGTTTTCTCAGCACCACTTATTTAACAAACTATCTTTTCTAATAGCTGTTTATTTG
GAAAAAAAACGGTGAAAATGAATAAAGTTTGGATAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTCTCTGCCAGGTTACTACAGCTCTGGCCCTGGCCAGTCTCCCCAGCCAGCTCCCGCAC
ATTCTGGTCAGCGCCTGCCAGGCTGTCCTGTCCGCACCGCTCAGCGCCAGGCCCTCCTCC
CTCCCCATCCCGCCCTCTCACACAATGACTGCGGTTCATCGGCCTTGACTCTGGCAACTG
AAGAGGTCAACACCCACCTCACCCGCAGCCCTAGCCCCTGTTGGTCCCTCAAAGAGAATC
AGAAAAGAGCCCCAGAAGATGCTGGATGCCTACACTGAGAGGGCGGGTGGGCCATCCTTA
GTGTGGGGCTCAGCACACGGTGGGCGCCCAAGACGAGCAGCTGCCATCCCAGGCACCCTT
CCTGCCTGAATCCAGTCCATCCTGAAAAGAGTGGGAGCACGTAGTCCACTCTTCCAGCTC
CTAGGATCCCAGAATTTCAGAGCACGACAAAGGGTGTTTTCAGTACCTCTGACGGGGAGT
TCCCTGGTGGCGCAGTGGGTTAAGAATCTGGTGTTGTGGAGTTCCTGTTGTGACAAACCA
GACTAGGATCCATGAAGATGCAGGCCTCTCCAGCTCACCGCCGTGCTTCAGACACATGGG
GACGTGGGCGACGACGGCGACAGTGTACACCTGGTTCAGGGGGCACAGGTGCAGACATGC
CTACCAGGACGTAGCTGAGGCTCCCTGCAGCTCCTGCCCACCCTGCTGCCCAGCACACAT
GCCCTTTAACTGTCTTTGCTGGCACACACGTGACCTCACAGTAGCTGTTTATTTGGCATG
ACTCTCAGAGGTGGATCTGAGAAAATGTTGCTGTGGTTTATGTCAGAGAGGGTTTGGCCT
ATGTTTTCCTCTAAGAGTTTTATAGTGTCTGGTCTTATATCCAGGTTTTTAATCCAGTTT
GAGTTTATTTTTCTGTATGGTGTGAGGGAGTGTTCTAATTTCATTCTTTCCCATGTGGGT
GTCCAGTTTTCTCAGCACCACTTATTTAACAAACTATCTTTTCTAATAGCTGTTTATTTG
GAAAAAAAACGGTGAAAATGAATAAAGTTTGGATAG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               719-1001, gnl|bosTau2|chr1 (58356337-58356618)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               719-1001, gnl|bosTau2|chr1 (58356337-58356618)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

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               jej (0.197844)
               

               
               fbs (0.175346)
               

               
               mcp (0.170648)
               

               
               spc (0.113366)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jej (0.197844)
               

               
               fbs (0.175346)
               

               
               mcp (0.170648)
               

               
               spc (0.113366)