Ss1.1-rfbs3928b_b17.5S
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TATACTAGTTACTCTAACATCATGTGTACAAGTCCTTTTGAAATGGTATGGCTTTAATAG TTTTCAGCTCTTTTATCCAGAGCTTGAGGCAATTAAAGCTGAGTTTTTCAGGGCATATTA CAATGGCAGAGTGTTCAACAGTAAGGTGTGAATGCTTATTTAGATTTGTCTACTGCTATT TATGTAAAAATTGTTTTCATTCCATTCAGAGGATGCCTTTTATCCCCCACATTAAAGCAC AGATCATTAAGCAATAAAAATCAATCAAATTGTCATCCAAATTATAACTGCAATTATTTT TGCATGGTAAGAGCGAGGTGCTAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TATACTAGTTACTCTAACATCATGTGTACAAGTCCTTTTGAAATGGTATGGCTTTAATAG TTTTCAGCTCTTTTATCCAGAGCTTGAGGCAATTAAAGCTGAGTTTTTCAGGGCATATTA CAATGGCAGAGTGTTCAACAGTAAGGTGTGAATGCTTATTTAGATTTGTCTACTGCTATT TATGTAAAAATTGTTTTCATTCCATTCAGAGGATGCCTTTTATCCCCCACATTAAAGCAC AGATCATTAAGCAATAAAAATCAATCAAATTGTCATCCAAATTATAACTGCAATTATTTT TGCATGGTAAGAGCGAGGTGCTAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 3-122, + strand, RNAz p=0.999727 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 3-122, + strand, RNAz p=0.999727 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 31-113, + strand, RNAmicro p=0.999945 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 3-324, gnl|bosTau2|chr20 (20971324-20971003) | |
| 3-324, gnl|Hg17|chr5 (38975207-38974906) | |
| 3-324, gnl|Mm7|chr15 (6625766-6626047) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-324, gnl|bosTau2|chr20 (20971324-20971003) | |
| 3-324, gnl|Hg17|chr5 (38975207-38974906) | |
| 3-324, gnl|Mm7|chr15 (6625766-6626047) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fbs (0.175346) | |
| spl (0.143184) |