Ss1.1-rfbs3929b_m22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACGAGAACACCCAACCTGGAGAGCAAGAAGGACCAAAGAGACCTGCAGGAAGTCACTCAA AAAATTATAGACGCGGTTGGGAACATTGCTGGTTCTTCCTTAGAACAAACCAGCTGGCTA AGCAGAAACCTGGAAGTGAAGGCCCAGGCTCAGATCTCACTAGAAGAATCTGATGCCGAG GAAGATTTGCACGATGCTGCCACGGCCGCTTCAGCGATGGTGTCCTCGTCAGCCCCTTCG GTGTACAGCGTGCAGGCCCTCTCCCTCCTGGCAGAGGTTCTGGCATCTCTCCTGGACATG GTTTATCGGAGTGATGAGAAGGAGAAAGCAGTGCCGCTGATCTCGCGTCTGCTGTACTAT GTTTTTCCTTACTTACGCAATCACAGCGCCTACAACACCCCCAGCTTCCGGGCTGGCTCC CAGCTGCTGAGTTCTCTGAGTGGTTATGCCTACACGAAACGAGCCTGAAAAAAAGAAGTC CTGGAATTATTCCTGGACCCGGCCTTCTTTCAGATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACGAGAACACCCAACCTGGAGAGCAAGAAGGACCAAAGAGACCTGCAGGAAGTCACTCAA AAAATTATAGACGCGGTTGGGAACATTGCTGGTTCTTCCTTAGAACAAACCAGCTGGCTA AGCAGAAACCTGGAAGTGAAGGCCCAGGCTCAGATCTCACTAGAAGAATCTGATGCCGAG GAAGATTTGCACGATGCTGCCACGGCCGCTTCAGCGATGGTGTCCTCGTCAGCCCCTTCG GTGTACAGCGTGCAGGCCCTCTCCCTCCTGGCAGAGGTTCTGGCATCTCTCCTGGACATG GTTTATCGGAGTGATGAGAAGGAGAAAGCAGTGCCGCTGATCTCGCGTCTGCTGTACTAT GTTTTTCCTTACTTACGCAATCACAGCGCCTACAACACCCCCAGCTTCCGGGCTGGCTCC CAGCTGCTGAGTTCTCTGAGTGGTTATGCCTACACGAAACGAGCCTGAAAAAAAGAAGTC CTGGAATTATTCCTGGACCCGGCCTTCTTTCAGATG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 77-196, - strand, RNAz p=0.632419 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 77-196, - strand, RNAz p=0.632419 |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 46-196, gnl|bosTau2|chr1 (96278041-96278191) | |
| 46-196, gnl|Hg17|chr21 (36564178-36564328) | |
| 46-196, gnl|Mm7|chr16 (93856311-93856460) | |
| 363-516, gnl|bosTau2|chr1 (96285171-96285324) | |
| 363-516, gnl|Hg17|chr21 (36572353-36572506) | |
| 363-516, gnl|Mm7|chr16 (93863572-93863721) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 46-196, gnl|bosTau2|chr1 (96278041-96278191) | |
| 46-196, gnl|Hg17|chr21 (36564178-36564328) | |
| 46-196, gnl|Mm7|chr16 (93856311-93856460) | |
| 363-516, gnl|bosTau2|chr1 (96285171-96285324) | |
| 363-516, gnl|Hg17|chr21 (36572353-36572506) | |
| 363-516, gnl|Mm7|chr16 (93863572-93863721) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fbs (0.175346) | |
| cst (0.140036) |